| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 541,994 | C→T | 5.7% | R77R (CGC→CGT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 541,994 | 0 | C | T | 5.7% | 653.5 / 17.8 | 209 | R77R (CGC→CGT) | rpoC | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (123/73); new base T (7/5); total (131/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 219 total aligned reads displayed.
GAAATGATCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCTTGCT > NC_002947/541845‑542143 | gAAATGATCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAgcgc < 2:1463470/150‑1 (MQ=255) aaaTGATCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGcc > 1:3504269/1‑150 (MQ=255) aTGATCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTc < 2:2385703/150‑1 (MQ=255) aTCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAg > 1:3833960/1‑150 (MQ=255) tCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGc > 1:2964535/1‑150 (MQ=255) tCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGc < 1:4396370/150‑1 (MQ=255) cGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCAc > 2:3142956/1‑150 (MQ=255) cGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCAc > 1:763773/1‑150 (MQ=255) ggTCGTTCGGTGAAGTTAAGAAGCCGGAAACCTTCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTTCGAGTGCCTGTGCGGCTAGTACTAGCGCCTCTAGCACCgcggcg < 2:114452/150‑1 (MQ=255) gTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAAt > 2:3061594/1‑150 (MQ=255) ggTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGc < 1:4937672/150‑1 (MQ=255) ggTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGc > 1:166405/1‑150 (MQ=255) tGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCga < 2:498210/150‑1 (MQ=255) tGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCga < 1:2332082/150‑1 (MQ=255) tGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCga < 2:637418/150‑1 (MQ=255) tGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCga < 2:694063/150‑1 (MQ=255) tGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCga < 1:1501745/150‑1 (MQ=255) ttAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGt > 2:2523413/1‑150 (MQ=255) aagaagCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTgc > 2:550749/1‑150 (MQ=255) gaagCCGGAGACGATCAACTATCGTACGTTCAAGCCTGAACGCGATGGTCTCTTCTGCGCGCGTATCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTgcgg < 2:2352132/150‑1 (MQ=255) agCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTgcggcg > 1:433043/1‑150 (MQ=255) gCCGGAGACGATCAACTATCGTACGTTCAAGCCTGAACGCGATGGTCTCTTCTGCGCGCGTATCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGt > 2:1004642/1‑150 (MQ=255) gCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGt > 1:2809999/1‑150 (MQ=255) ccGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCACGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGtt > 2:3933832/1‑150 (MQ=255) gtaaaCCATCAACTACGGTAGGTTCAAGACTGAGCGTGACTGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGACTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAGGTGCGGCGTTgt > 2:3380578/3‑149 (MQ=255) gAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGaa > 1:2452419/1‑150 (MQ=255) cATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGc > 2:4594766/1‑150 (MQ=255) cATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGc > 2:4549246/1‑150 (MQ=255) cATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGc > 1:3727140/1‑150 (MQ=255) cATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGc > 2:4281109/1‑150 (MQ=255) aTCAACTACCGTACGTTAAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGcc > 2:4878692/1‑150 (MQ=255) tCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGccc > 2:1706104/1‑150 (MQ=255) tACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGCGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCg > 2:2948801/1‑150 (MQ=255) ccGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGaa < 1:2344353/150‑1 (MQ=255) tCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTtcgtc < 1:3073476/150‑1 (MQ=255) cAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTtcgtcg > 1:2420117/1‑150 (MQ=255) aaGCCTGAACGCGATGGTCTCTTCTGCGCGCGTATCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTcgtcgt > 1:2771896/1‑150 (MQ=255) gCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGa < 1:4139503/150‑1 (MQ=255) gCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGa > 1:1089079/1‑150 (MQ=255) gCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGa < 1:3224855/150‑1 (MQ=255) gCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGa < 1:3105031/150‑1 (MQ=255) cTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAgc > 1:2260362/1‑150 (MQ=255) cTGAACGCGATGGTCTCTTCTGCGCGCGTATCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAgc > 2:3603291/1‑150 (MQ=255) ccTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACAt > 2:2232229/1‑150 (MQ=255) cTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATc < 2:217659/150‑1 (MQ=255) cTGTTCTGCGCCAAGATCATTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATc < 1:4048740/150‑1 (MQ=255) tGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCg > 1:4848246/1‑150 (MQ=255) gTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCCCCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGa > 1:2854351/1‑150 (MQ=255) ttCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAg < 1:2182193/150‑1 (MQ=255) cTGCGCCACGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCt < 2:436807/150‑1 (MQ=255) cTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCt < 2:128988/150‑1 (MQ=255) cTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCt < 2:1916581/150‑1 (MQ=255) tGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTg < 1:389619/150‑1 (MQ=255) tGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTg < 2:618695/150‑1 (MQ=255) cgcgcgtaTCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGc < 2:3272743/143‑1 (MQ=255) cgcgcgtaTCTTTGGCCCGATCAAGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGc < 2:707491/143‑1 (MQ=255) gcCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGcc > 1:4767111/1‑150 (MQ=255) gcCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGcc > 2:3910735/1‑150 (MQ=255) ccAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCt > 1:4653515/1‑150 (MQ=255) ccAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCt > 2:3181185/1‑150 (MQ=255) cAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTc > 1:4891896/1‑150 (MQ=255) aaGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCg > 2:1889418/1‑150 (MQ=255) aGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGc > 1:2395644/1‑150 (MQ=255) aGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGc < 1:4322894/150‑1 (MQ=255) gATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGcc < 1:4233648/150‑1 (MQ=255) aTCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCg < 1:2190976/150‑1 (MQ=255) tttGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGtt > 1:435347/1‑150 (MQ=255) tttGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGtt > 1:4314795/1‑150 (MQ=255) cccAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTAGCCca > 1:2944669/1‑150 (MQ=255) cAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGTGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCcaca > 2:1623767/1‑150 (MQ=255) aGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACAt < 2:4188601/150‑1 (MQ=255) aGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACAt > 2:2486776/1‑150 (MQ=255) aaGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGCAGCACCTGTTGCCCATATCTgg > 2:4650543/1‑150 (MQ=255) aaGGATTATGAATGCTTGTGCGGCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGCAGCACCTGTTGCCCATATCTgg > 1:4749015/1‑150 (MQ=255) aaGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTgg > 2:4715108/1‑150 (MQ=255) aaGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTgg > 1:1449361/1‑150 (MQ=255) cTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCt < 2:3504269/150‑1 (MQ=255) tACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTg > 2:3803463/1‑150 (MQ=255) cGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGaa < 2:166405/150‑1 (MQ=255) cGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGaa < 2:4114242/150‑1 (MQ=255) cGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGaa > 2:3985637/1‑150 (MQ=255) tgtgCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCACATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGc > 1:1518661/1‑150 (MQ=255) gtgCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGcc > 1:2470417/1‑150 (MQ=255) cGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTc < 1:3449996/150‑1 (MQ=255) gCAAGTACAAGCGTATGAAATACAAAGGCATCATCTGCGAAAAGTGCGGCGTTGAAGTCACGCTGTCGCGCGTTCGTCGTGAGCGCATGGGCCATATTGAGCTCGCAGCACCTGTTGCCCATATCTGGTTCTTGAAGTCGCTGCCATcgc < 1:5223/150‑3 (MQ=255) gCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCAt < 2:2879627/88‑1 (MQ=255) gCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCAt > 1:2879627/1‑88 (MQ=255) gCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTccc < 2:798312/150‑1 (MQ=255) gCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTccc > 2:2146852/1‑150 (MQ=255) cAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCg > 2:1971593/1‑150 (MQ=255) gTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTAt > 1:2035958/1‑150 (MQ=255) gTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTAt > 2:3299153/1‑150 (MQ=255) aCAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCg < 1:673350/150‑1 (MQ=255) cAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCgg < 1:555483/150‑1 (MQ=255) cAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCgg > 2:1687737/1‑150 (MQ=255) aaGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGc < 1:4432747/150‑1 (MQ=255) aaGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGc > 2:4099119/1‑150 (MQ=255) aaGCGACTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGc > 2:1944307/1‑150 (MQ=255) cgcCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCACCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCTTg < 2:2464807/150‑1 (MQ=255) gcCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCTTGc > 1:1639556/1‑150 (MQ=255) | GAAATGATCCGTTCGTGGTCGTTCGGTGAAGTTAAGAAGCCGGAAACCATCAACTACCGTACGTTCAAGCCTGAGCGTGACGGCCTGTTCTGCGCCAAGATCTTTGGCCCAGTCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGCGTAATCTGCGAGAAGTGCGGCGTTGAAGTTGCCCTGGCGAAGGTTCGTCGTGAGCGCATGGCGCACATCGAGCTGGCCTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCTTGCT > NC_002947/541845‑542143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |