BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	554,513	C→A	8.1%	A150A (GCC→GCA)	rpsC →	30S ribosomal protein S3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	554,513	0	C	A	8.1%	681.3 / 36.6	209	A150A (GCC→GCA)	rpsC	30S ribosomal protein S3
Reads supporting (aligned to +/- strand): ref base C (105/87); new base A (12/5); total (117/92)
Fisher's exact test for biased strand distribution p-value = 3.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01

Only 100 of 213 total aligned reads displayed.

ACCAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACAC  >  NC_002947/554364‑554662

aCCAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGcc                                                                                                                                                       >  1:1301472/1‑150 (MQ=255)

  cAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCACGCCGGAACTCGACGCTATGCTGGTTGCGCAGATCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACTCCAt                                                                                                                                                     <  2:3999632/150‑1 (MQ=255)

  cAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCAt                                                                                                                                                     >  1:3557654/1‑150 (MQ=255)

  cAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCAt                                                                                                                                                     <  2:4669632/150‑1 (MQ=255)

   aaGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATg                                                                                                                                                    >  1:1722938/1‑150 (MQ=255)

    aGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGc                                                                                                                                                   >  1:572486/1‑150 (MQ=255)

    aGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGc                                                                                                                                                   <  1:2829368/150‑1 (MQ=255)

    aGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGc                                                                                                                                                   >  1:3127441/1‑150 (MQ=255)

    aGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGc                                                                                                                                                   <  2:2927256/150‑1 (MQ=255)

       aGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTa                                                                                                                                                <  2:5106266/150‑1 (MQ=255)

        gATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTAt                                                                                                                                               <  2:4412598/150‑1 (MQ=255)

         aTGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTAtt                                                                                                                                              >  1:4842002/1‑150 (MQ=255)

         aTGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTAtt                                                                                                                                              >  1:1254350/1‑150 (MQ=255)

          tGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTg                                                                                                                                             <  1:327519/150‑1 (MQ=255)

          tGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTg                                                                                                                                             <  2:4353263/150‑1 (MQ=255)

          tGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTg                                                                                                                                             <  1:2327704/150‑1 (MQ=255)

             gtgtGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTg                                                                                                                                          >  2:351426/1‑150 (MQ=255)

             gagtgCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTg                                                                                                                                          >  1:4504044/3‑150 (MQ=255)

                   cTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGTGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAgg                                                                                                                                    <  1:2146196/150‑1 (MQ=255)

                   cTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAgg                                                                                                                                    >  1:1659554/1‑150 (MQ=255)

                   cTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAgg                                                                                                                                    <  1:4139354/150‑1 (MQ=255)

                      tgCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCa                                                                                                                                 >  2:759/1‑150 (MQ=255)

                       gCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCAt                                                                                                                                <  1:2478206/150‑1 (MQ=255)

                       gCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCAt                                                                                                                                <  1:255693/150‑1 (MQ=255)

                           aTCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAg                                                                                                                            >  1:99448/1‑150 (MQ=255)

                           aTCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAg                                                                                                                            >  1:564557/1‑150 (MQ=255)

                           aTCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAg                                                                                                                            >  2:2890724/1‑150 (MQ=255)

                           aTCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTAGCGCATAGCGTAGATCAGCAGCAGGAACGCCGTGTAATTTTCCGTCCCGCCATGAAGCGTCCGCTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAg                                                                                                                            >  1:3678635/1‑150 (MQ=255)

                            tCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGa                                                                                                                           >  1:1900506/1‑150 (MQ=255)

                                 aTCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCTCCATGAAGCGTGCGGTACAGAACGCCATGAGTATTGGTGCCAAGGGCATCAAGATCCAg                                                                                                                      <  2:713/150‑1 (MQ=255)

                                 aTCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAg                                                                                                                      <  1:4782605/150‑1 (MQ=255)

                                    gAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTg                                                                                                                   >  2:2085076/1‑150 (MQ=255)

                                    gAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTg                                                                                                                   >  1:3944313/1‑150 (MQ=255)

                                     aaGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGt                                                                                                                                           >  2:1103677/1‑125 (MQ=255)

                                          aTCCGCAAGCCGGAACTCGACGCTCTGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGACCGCCATGCGGATTGGTGCCAAGGGCAGCAAGATCCAGGTGAGCggg                                                                                                             >  2:2701599/1‑149 (MQ=255)

                                           tCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGgtc                                                                                                            <  1:4547289/150‑1 (MQ=255)

                                              gCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGgtcgtc                                                                                                         >  2:1677322/1‑150 (MQ=255)

                                              gCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGgtcgtc                                                                                                         >  2:3030023/1‑150 (MQ=255)

                                                  gCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTcgg                                                                                                     <  2:4255044/150‑1 (MQ=255)

                                                    cGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTcggcg                                                                                                   <  1:2048440/150‑1 (MQ=255)

                                                    cGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTcggcg                                                                                                   <  1:2523216/150‑1 (MQ=255)

                                                          tCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTg                                                                                             >  1:2316487/1‑150 (MQ=255)

                                                          tCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTg                                                                                             >  2:100444/1‑150 (MQ=255)

                                                           cGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTga                                                                                            <  1:4189731/150‑1 (MQ=255)

                                                               gCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGAtt                                                                                        <  2:2384581/150‑1 (MQ=255)

                                                               gCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGAtt                                                                                        >  2:1912871/1‑150 (MQ=255)

                                                                 tATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGc                                                                                      <  2:4765579/150‑1 (MQ=255)

                                                                      tGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTa                                                                                 <  1:1615707/150‑1 (MQ=255)

                                                                       ggTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTAc                                                                                <  1:3886931/150‑1 (MQ=255)

                                                                          tGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGa                                                                             <  2:3818852/150‑1 (MQ=255)

                                                                             gcAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTg                                                                          >  1:2880940/1‑150 (MQ=255)

                                                                                   gatcgCTCAGCAGCTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTTCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATcg                                                                    >  2:3519735/5‑150 (MQ=255)

                                                                                   gatcgCTCAGCAGCTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATcg                                                                    <  1:399058/146‑1 (MQ=255)

                                                                                    gTAGCTCAGCAGCTGGAACGCCGTGTAATGTTGCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTTGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTTGTATcgc                                                                   <  2:358688/150‑1 (MQ=255)

                                                                                    gTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATcgc                                                                   <  2:502149/150‑1 (MQ=255)

                                                                                     tAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATcgcg                                                                  >  1:2267249/1‑150 (MQ=255)

                                                                                     tAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATcgcg                                                                  >  1:2267106/1‑150 (MQ=255)

                                                                                       gCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGaa                                                                <  1:1003930/150‑1 (MQ=255)

                                                                                       gCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGaa                                                                <  1:3785547/150‑1 (MQ=255)

                                                                                       gCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGaa                                                                <  1:3385929/150‑1 (MQ=255)

                                                                                       gCTCAGCAGCTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGaa                                                                >  2:1446298/1‑150 (MQ=255)

                                                                                        cTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAg                                                               <  1:181782/150‑1 (MQ=255)

                                                                                        cTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAg                                                               >  1:1803902/1‑150 (MQ=255)

                                                                                         tCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGTGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATAGCGAAgg                                                              >  2:4911358/1‑150 (MQ=255)

                                                                                         tCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAgg                                                              >  2:3773790/1‑150 (MQ=255)

                                                                                         tCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAgg                                                              >  1:1962528/1‑150 (MQ=255)

                                                                                           agcagcTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTc                                                            >  2:2236816/1‑150 (MQ=255)

                                                                                           agcagcTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTc                                                            >  1:3308098/1‑150 (MQ=255)

                                                                                               gcTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCgtgt                                                        <  2:4666770/150‑1 (MQ=255)

                                                                                               gcTCGAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCgcgt                                                        >  2:2350115/1‑150 (MQ=255)

                                                                                                cTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGtgtg                                                       >  1:753645/1‑150 (MQ=255)

                                                                                                 tcgAACGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCgcgttc                                                      >  1:3491150/3‑148 (MQ=255)

                                                                                                  ggAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGcc                                                     <  1:949043/150‑1 (MQ=255)

                                                                                                   gAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCct                                                    >  2:727764/1‑150 (MQ=255)

                                                                                                    aaCGCCGTGTGGCATTCCGTCGCGCCATGAAGCGTGCCGTTCAGTCGGCAATGCGTCTCGGTGCTGAAGGTATCCGTATCAACTGCTCCGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTccgc                                                   <  1:1571251/150‑3 (MQ=255)

                                                                                                     aCGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCctct                                                  <  1:2120458/150‑1 (MQ=255)

                                                                                                      cGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTg                                                 <  2:271519/150‑1 (MQ=255)

                                                                                                      cGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTg                                                 <  2:1254350/150‑1 (MQ=255)

                                                                                                           tgtAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCacac                                            >  2:1320908/1‑150 (MQ=255)

                                                                                                           tgtAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCacac                                            >  2:4585211/1‑150 (MQ=255)

                                                                                                                 gTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCg                                      <  2:2470090/150‑1 (MQ=255)

                                                                                                                  ttCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCgt                                                          >  2:284714/1‑129 (MQ=255)

                                                                                                                  ttCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGt                                     >  2:3951139/1‑150 (MQ=255)

                                                                                                                    ccGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGc                                   <  2:4553726/150‑1 (MQ=255)

                                                                                                                           gcCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATc                            <  1:4323385/150‑1 (MQ=255)

                                                                                                                             cATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGa                          >  2:3143963/1‑150 (MQ=255)

                                                                                                                              aTGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGAc                         <  2:3111208/150‑1 (MQ=255)

                                                                                                                              aTGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGAc                         >  1:3589883/1‑150 (MQ=255)

                                                                                                                              aTGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGAc                         <  2:1170625/150‑1 (MQ=255)

                                                                                                                              aTGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGAc                         >  2:2326231/1‑150 (MQ=255)

                                                                                                                              aTGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGAc                         <  2:301408/150‑1 (MQ=255)

                                                                                                                                 aaGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTac                      >  1:1393556/1‑150 (MQ=255)

                                                                                                                                   gCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTacaa                    >  1:4879029/1‑150 (MQ=255)

                                                                                                                                     gTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTacaaca                  <  1:1012360/150‑1 (MQ=255)

                                                                                                                                          gTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTAc             >  1:2426357/1‑150 (MQ=255)

                                                                                                                                              aGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGt                                     >  1:37482/1‑122 (MQ=255)

                                                                                                                                              aGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGt                                     <  2:37482/122‑1 (MQ=255)

                                                                                                                                                  cGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCTTGCCGATATCGACTACAACACCTACGAAGCTca     <  2:3336814/150‑1 (MQ=255)

                                                                                                                                                  cGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTca     <  2:4151082/150‑1 (MQ=255)

                                                                                                                                                     cATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCacac  <  2:1301472/150‑1 (MQ=255)

ACCAAGCAGATGGGTGTGCCTGTGCACATCAACATCGAAGAGATCCGCAAGCCGGAACTCGACGCTATGCTGGTTGCGCAGAGCGTAGCTCAGCAGCTGGAACGCCGTGTAATGTTCCGTCGCGCCATGAAGCGTGCGGTACAGAACGCCATGCGTATTGGTGCCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACAC  >  NC_002947/554364‑554662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`