BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	554,676	A→T	6.2%	I205F (ATC→TTC) ‡	rpsC →	30S ribosomal protein S3

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	554,676	0	A	T	6.2%	576.6 / 17.8	172	I205F (ATC→TTC) ‡	rpsC	30S ribosomal protein S3
Reads supporting (aligned to +/- strand): ref base A (60/101); new base T (4/7); total (64/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 173 total aligned reads displayed.

CCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCA  >  NC_002947/554527‑554824

  aaGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATc                                                                                                                                                    <  1:3030023/150‑1 (MQ=255)

   aGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCg                                                                                                                                                   <  2:99448/150‑1 (MQ=255)

     ggCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGgt                                                                                                                                                 <  2:1641290/150‑1 (MQ=255)

     ggCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGgt                                                                                                                                                 <  2:4842002/150‑1 (MQ=255)

     ggCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGgt                                                                                                                                                 <  1:2085076/150‑1 (MQ=255)

       cATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGgtgt                                                                                                                                               <  2:4614758/150‑1 (MQ=255)

        aTCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGtgtg                                                                                                                                              >  2:1916494/1‑150 (MQ=255)

         tCAAGATCGAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTAGCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCAGACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTCCGGTGTGATCGGTGTGa                                                                                                                                             <  2:4504044/150‑1 (MQ=255)

         tCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGa                                                                                                                                             <  1:351426/150‑1 (MQ=255)

         tCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGa                                                                                                                                             <  2:4504061/150‑1 (MQ=255)

           aaGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAg                                                                                                                                           <  2:3944313/150‑1 (MQ=255)

               tCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGTTCGTGTGCCTCTGCACACCCTGCGTGCCGTTATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGttt                                                                                                                                       <  2:3678635/150‑1 (MQ=255)

               tCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGttt                                                                                                                                       <  2:2316424/150‑1 (MQ=255)

               tCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGttt                                                                                                                                       <  2:4044494/150‑1 (MQ=255)

                ccAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTg                                                                                                                                      <  2:3557085/150‑1 (MQ=255)

                 cAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTgg                                                                                                                                     <  2:3887257/150‑1 (MQ=255)

                  aGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGa                                                                                                                                    <  2:193830/150‑1 (MQ=255)

                   ggTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGAt                                                                                                                                   >  2:875111/1‑150 (MQ=255)

                        gCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCa                                                                                                                              >  2:3089063/1‑150 (MQ=255)

                         cGGTCGTCTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCaa                                                                                                                             >  2:2993638/1‑150 (MQ=255)

                          ggTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCaaa                                                                                                                            <  1:2701612/150‑1 (MQ=255)

                            tcgtcTTGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCAAggg                                                                                                                          <  1:3311039/150‑1 (MQ=255)

                             cgtcTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGc                                                                                                                         <  1:1677322/150‑1 (MQ=255)

                              gtcTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCg                                                                                                                        <  1:3963661/150‑1 (MQ=255)

                               tcttGGCGGCGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCAAGGGCGa                                                                                                                       >  1:4038895/1‑150 (MQ=255)

                               tctcGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGa                                                                                                                       <  2:2267106/150‑1 (MQ=255)

                               tctcGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGa                                                                                                                       <  2:2267249/150‑1 (MQ=255)

                                cttggcggcGCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCAAGGGCGag                                                                                                                      <  1:3127818/147‑2 (MQ=255)

                                ctcGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGaa                                                                                                                      <  2:2049292/150‑1 (MQ=255)

                                 tcGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGa                                                                                                                                             >  1:5020242/1‑126 (MQ=255)

                                    gcggcgCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCAAGGGCGagatcc                                                                                                                  >  2:335424/1‑145 (MQ=255)

                                    gcggcgCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTGGGTATTCAAGGGCGagatcc                                                                                                                  <  2:24053/150‑6 (MQ=255)

                                      ggTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTAtt                                                                                                                <  2:2496037/150‑1 (MQ=255)

                                      ggTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTAtt                                                                                                                <  2:1722938/150‑1 (MQ=255)

                                       gTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATtg                                                                                                               <  1:2723316/150‑1 (MQ=255)

                                       gTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATtg                                                                                                               <  1:2630505/150‑1 (MQ=255)

                                       gTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCGACGAAGCTCACACCACTTCCGGTGTGATCGGTGTGAAGGTTTGGATCTTCAACGGCGAAGTTATtg                                                                                                               <  2:564618/150‑1 (MQ=255)

                                         gCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTgg                                                                                                                                     >  1:1306714/1‑126 (MQ=255)

                                         gCTGAAATCGCACGTATGGAATGGTATCGCGAAGGTCGCGTTCCGCTTCACACGCTGCGTGCCGATATCGACTACGGTACGGCAGAAGCGCAGACCGCTTACGGCATCTGCGGCGTGAAGGTTTgg                                                                                                                                     <  2:1306714/126‑1 (MQ=255)

                                           tGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATtggtgg                                                                                                           >  2:789830/1‑150 (MQ=255)

                                           tGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATtggtgg                                                                                                           >  2:2298732/1‑150 (MQ=255)

                                           tGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGAACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATtggtgg                                                                                                           >  2:789685/1‑150 (MQ=255)

                                            gagaTTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTggtggt                                                                                                          >  1:593076/1‑150 (MQ=255)

                                             agaTTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTc                                                                                                         >  2:2187161/1‑150 (MQ=255)

                                               aTTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGc                                                                                                       <  1:2864161/150‑1 (MQ=255)

                                                    tCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCaaga                                                                                                  >  2:2431395/1‑150 (MQ=255)

                                                        aCCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAgaagaa                                                                                              <  1:1111423/150‑1 (MQ=255)

                                                         ccGAGTGGTATAGCGAAGGTCGTGTGCCTCTGCACACCCTGCTTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAATGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAAc                                                                                             <  2:713141/150‑1 (MQ=255)

                                                          cGAGTTGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGTCTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACt                                                                                            <  1:1912871/150‑1 (MQ=255)

                                                           gAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTg                                                                                           >  2:1829985/1‑150 (MQ=255)

                                                               ggTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAAc                                                                                       <  1:100444/150‑1 (MQ=255)

                                                                   tCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACcaca                                                                                   >  1:2789411/1‑150 (MQ=255)

                                                                    cgcgAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGTAGTTATTGGTGGTCGCCAAGAAGAACTGTAACCACaa                                                                                  <  2:4827371/150‑1 (MQ=255)

                                                                       gAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTCACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCa                                                                               >  1:1216855/1‑150 (MQ=255)

                                                                            tCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGgt                                                                                                                                                 <  1:17212/79‑1 (MQ=255)

                                                                            tCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAgc                                                                          <  2:1962528/150‑1 (MQ=255)

                                                                              gtgtGCCACTGCACACCATGAGTGCCTATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAgcgc                                                                        >  2:122519/1‑150 (MQ=255)

                                                                               tgtgCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGcc                                                                       >  1:3021150/1‑150 (MQ=255)

                                                                               tgtgCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGcc                                                                       <  2:4879029/150‑1 (MQ=255)

                                                                                 tgCCTCTGCACACCCTGCGTGCCGATATCGACTACAACAACTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTc                                                                     <  1:4911358/150‑1 (MQ=255)

                                                                                    ctctGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAAcc                                                                                      >  1:932734/1‑130 (MQ=255)

                                                                                    ctctGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTa                                                                  >  1:4450452/1‑150 (MQ=255)

                                                                                    ctctGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTa                                                                  >  2:5031231/1‑150 (MQ=255)

                                                                                    ctctGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTa                                                                  >  1:548960/1‑150 (MQ=255)

                                                                                     tctGCACACCCTGCTTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTaa                                                                 >  2:3193953/1‑150 (MQ=255)

                                                                                     tctGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTaa                                                                 <  2:1803863/150‑1 (MQ=255)

                                                                                        gCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTaaaaa                                                              <  1:727764/150‑1 (MQ=255)

                                                                                        gCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTaaaaa                                                              >  2:53703/1‑150 (MQ=255)

                                                                                         cacaCCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTaaaaaa                                                             <  1:1309998/150‑1 (MQ=255)

                                                                                            acCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAgct                                                          <  2:557208/150‑1 (MQ=255)

                                                                                            acCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAgct                                                          <  2:4459868/150‑1 (MQ=255)

                                                                                             cccTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAgctg                                                         <  2:1706100/150‑1 (MQ=255)

                                                                                              ccTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAgctgc                                                        <  1:4585211/150‑1 (MQ=255)

                                                                                                 gCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCtaa                                                     <  2:100816/150‑1 (MQ=255)

                                                                                                    tGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCtaagta                                                  <  1:2326231/150‑1 (MQ=255)

                                                                                                       cGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAgg                                               <  2:2571904/150‑1 (MQ=255)

                                                                                                        gATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAggg                                              <  2:2780746/150‑1 (MQ=255)

                                                                                                         atatCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAgggg                                             >  2:3284856/1‑150 (MQ=255)

                                                                                                            tCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTAc                                          <  1:4159290/150‑1 (MQ=255)

                                                                                                              gACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCTGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGc                                        >  1:2411082/1‑150 (MQ=255)

                                                                                                              gACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGc                                        >  1:2887390/1‑150 (MQ=255)

                                                                                                              gACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGc                                        >  1:2887378/1‑150 (MQ=255)

                                                                                                               aCTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGcc                                       >  1:1327770/1‑150 (MQ=255)

                                                                                                                   caacaCCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAAt                                   >  2:2528419/1‑150 (MQ=255)

                                                                                                                   caacaCCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAAt                                   >  2:3998086/1‑150 (MQ=255)

                                                                                                                     acacCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGt                                 >  1:3489586/1‑150 (MQ=255)

                                                                                                                     acacCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGt                                 >  1:370056/1‑150 (MQ=255)

                                                                                                                     acacCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGt                                 <  1:868543/150‑1 (MQ=255)

                                                                                                                      cacCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGtt                                <  1:3143963/150‑1 (MQ=255)

                                                                                                                           aCGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAAc                           >  1:5063647/1‑150 (MQ=255)

                                                                                                                                  tCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCg                    >  1:4257655/1‑150 (MQ=255)

                                                                                                                                    acacCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCgga                  >  1:5022990/1‑148 (MQ=255)

                                                                                                                                    acacCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTa                  >  1:2212982/1‑150 (MQ=255)

                                                                                                                                    acacAAATTACGGTGTGATCGGTGTGAAGGTTTTTATCTTCAAAGGCGAAGTTATTGGTGGTCGCGTATAAGTAGTGAAACCACAAGCACCAGCGGGTCGTAAAAAATCTGATATGTGAGGGGTAGGCCAATTGTTGCAACaaaatggta                  >  2:4302057/1‑145 (MQ=255)

                                                                                                                                     caccacTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTAc                 >  2:370453/1‑150 (MQ=255)

                                                                                                                                      accacTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACa                <  1:4689146/150‑1 (MQ=255)

                                                                                                                                          cTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAAt            >  2:1449226/1‑150 (MQ=255)

                                                                                                                                            tACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTc          <  1:3867025/150‑1 (MQ=255)

                                                                                                                                                 tgtgATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAATAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACTAAATTCCGCaa     <  2:3586440/150‑1 (MQ=255)

                                                                                                                                                    gATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCa  >  2:1862486/1‑150 (MQ=255)

CCAAGGGCATCAAGATCCAGGTGAGCGGTCGTCTCGGCGGTGCTGAGATTGCTCGTACCGAGTGGTATCGCGAAGGTCGTGTGCCTCTGCACACCCTGCGTGCCGATATCGACTACAACACCTACGAAGCTCACACCACTTACGGTGTGATCGGTGTGAAGGTTTGGATCTTCAAAGGCGAAGTTATTGGTGGTCGCCAAGAAGAACTGAAACCACAAGCACCAGCGCCTCGTAAAAAAGCTGCTAAGTAAGGGGTACGCCAAATGTTGCAACCAAAGCGTACAAAATTCCGCAAGCA  >  NC_002947/554527‑554824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`