| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 566,623 | C→T | 6.5% | intergenic (+32/+41) | bfr‑I → / ← uvrA | bacterioferritin/uvrABC excinuclease protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 566,623 | 0 | C | T | 6.5% | 526.0 / 17.4 | 170 | intergenic (+32/+41) | bfr‑I/uvrA | bacterioferritin/uvrABC excinuclease protein A |
| Reads supporting (aligned to +/- strand): ref base C (84/75); new base T (4/7); total (88/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
TGACATCCTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTG > NC_002947/566474‑566772 | aCATCCTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCAc > 1:2162084/1‑150 (MQ=255) tCCTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCAt > 2:2518465/1‑150 (MQ=255) ccTGCGTGCGCAGCTGGCCGACACCCAAGAAGATCACACCTACTGGCATGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGCCTGGAAAACTACCAGCACTCGCAGATGTAAGTTATCCACACACTCAAGTAAAAGCCCCTGGCACCATc < 2:666061/150‑1 (MQ=255) cTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCg > 1:261919/1‑150 (MQ=255) cTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCg > 1:261874/1‑150 (MQ=255) gcgcAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCa < 2:1814685/150‑1 (MQ=255) gcAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAgg < 1:3329647/150‑1 (MQ=255) cAGCTGGCCGACACCGAAGAAGATCACACCTTCTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg < 1:3748645/150‑1 (MQ=255) cAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAggg < 1:1872640/150‑1 (MQ=255) cAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg < 1:2772631/150‑1 (MQ=255) cAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg < 1:4866496/150‑1 (MQ=255) cAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAggg < 2:1538653/150‑1 (MQ=255) aGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAgggg > 2:4803111/1‑150 (MQ=255) tGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAGGGGCtt < 2:2672167/150‑1 (MQ=255) gaagACACCGAAGAAGATCACACCTACTGGCTTCAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCtttt > 2:3492983/4‑150 (MQ=255) gCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCtttt < 2:1295628/150‑1 (MQ=255) gCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCtttt > 2:2015678/1‑150 (MQ=255) gCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCtttt > 1:2827531/1‑150 (MQ=255) gACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCa < 2:3320026/150‑1 (MQ=255) acacCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGTACCGATGGTGCCAGGGGCttttactt < 2:4630149/150‑5 (MQ=39) acacCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCGGGGGCTTTTTCAt < 1:83578/150‑1 (MQ=255) cacCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt < 1:1895365/150‑1 (MQ=255) cacCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt < 2:2989079/150‑1 (MQ=255) acCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGTGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTACAAGCCCCTGGTACCGATGGTGCCAGGGGCttttacttga < 1:753984/150‑7 (MQ=38) acCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTg > 1:4520242/1‑150 (MQ=255) ccGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTgc < 1:3194679/150‑1 (MQ=255) aagaagATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGcc > 1:1886398/1‑150 (MQ=255) gaagaTCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCgg < 2:2735506/150‑1 (MQ=255) acacCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt < 2:2299549/136‑1 (MQ=255) acacCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCAtt > 1:2299549/1‑136 (MQ=255) acacCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACt < 2:4364510/150‑1 (MQ=255) acacCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACt < 2:4364509/150‑1 (MQ=255) cacCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTc > 1:4950076/1‑150 (MQ=255) cTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAgg < 1:1103413/150‑1 (MQ=255) cTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAgg > 2:3097516/1‑150 (MQ=255) tACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGc > 1:2679011/1‑150 (MQ=255) tACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGc > 2:1086136/1‑150 (MQ=255) tACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGc < 2:1316111/150‑1 (MQ=255) tACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGc < 2:1632874/150‑1 (MQ=255) tGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCt > 1:4615766/1‑150 (MQ=255) tGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCt > 2:3733798/1‑150 (MQ=255) ttGAGAAGCCGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATcc < 1:3690805/150‑1 (MQ=255) ttGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATcc > 1:1067999/1‑150 (MQ=255) ttGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATcc > 2:1217172/1‑150 (MQ=255) gagaAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCg > 1:1551425/1‑150 (MQ=255) gcagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCa > 2:4661686/1‑150 (MQ=255) cagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCaa < 1:3339089/150‑1 (MQ=255) cagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCaa < 1:3820332/150‑1 (MQ=255) cagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCaa > 1:578194/1‑150 (MQ=255) cagGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCaa < 1:3820410/150‑1 (MQ=255) agGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAAt > 2:490667/1‑150 (MQ=255) gggCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATg < 2:1817164/150‑1 (MQ=255) gCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGt > 2:4041048/1‑150 (MQ=255) cTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGttt > 2:2155414/1‑150 (MQ=255) tGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTc < 1:4046853/150‑1 (MQ=255) tGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTc < 2:889343/150‑1 (MQ=255) gATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCa < 1:1220043/150‑1 (MQ=255) gATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCa > 2:3266879/1‑150 (MQ=255) aTCAAGGCCATCGGGCTGGAAAACTACATGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAg < 1:728262/150‑1 (MQ=255) tCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAgg < 2:390029/150‑1 (MQ=255) tCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCg < 2:1193801/150‑1 (MQ=255) cGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCgg < 1:3298640/150‑1 (MQ=255) gggCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGt < 2:3491788/150‑1 (MQ=255) ggCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAg > 2:2138573/1‑78 (MQ=255) tGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTatat > 1:3016019/1‑150 (MQ=255) gAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGa > 1:4404897/1‑150 (MQ=255) aCTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGc < 2:4999317/150‑1 (MQ=255) tACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCtt > 1:2073917/1‑150 (MQ=255) gCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCAtct < 1:4690038/150‑1 (MQ=255) gCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCAtct < 2:819679/150‑1 (MQ=255) aGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCg > 1:473804/1‑150 (MQ=255) gTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGc > 1:4483296/1‑150 (MQ=255) tCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCt > 1:632927/1‑150 (MQ=255) gCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCa < 2:2678796/150‑1 (MQ=255) gCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCa > 1:395145/1‑150 (MQ=255) gCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCa > 2:24069/1‑150 (MQ=255) gCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCa > 1:4975243/1‑150 (MQ=255) gCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCa > 2:3564104/1‑150 (MQ=255) gTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCtctt > 1:2436877/1‑150 (MQ=255) tAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCtcttc < 2:261874/150‑1 (MQ=255) aaGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCtcttct > 2:457545/1‑150 (MQ=255) ttATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTAAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGgt < 1:2966568/150‑1 (MQ=255) cAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCaa < 1:502605/150‑1 (MQ=255) aaGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAAt > 1:1168670/1‑150 (MQ=255) aaGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAAt > 2:350019/1‑150 (MQ=255) aGTAAAAGCCCCTGACACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGcc > 1:912144/1‑98 (MQ=255) gTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGa > 1:4157145/1‑150 (MQ=255) aaaaGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATc < 1:1320588/150‑1 (MQ=255) aaaGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCt < 2:5101921/150‑1 (MQ=255) ccccTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTCATGGCCGGTATATGACTGCTGCTTCTCGCTCAGCTCTTCTGGTGTACCGCAGGCACTGATCTGccc > 2:4239211/1‑150 (MQ=255) ccccTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGccc > 2:2065440/1‑150 (MQ=255) ccccTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGccc > 1:4095332/1‑150 (MQ=255) cccTGGTACCGATGGTGCCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCa > 2:3342317/1‑150 (MQ=255) cccTGGTACCGATGGTGCCAGGGGCTTTTACATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTg > 2:1951432/1‑124 (MQ=38) cccTGGTACCGATGGTGCCAGGGGCTTTTACATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTg < 1:1951432/124‑1 (MQ=38) cccTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCa > 1:2811598/1‑150 (MQ=255) ccTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCAc > 1:4522659/1‑150 (MQ=255) cTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCAcc > 1:3261282/1‑150 (MQ=255) tGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTCCCGCAGGCCATGATCTGCCCAccc > 2:3321261/1‑150 (MQ=255) gCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCCGCCCACCCtt < 2:2827531/150‑1 (MQ=255) | TGACATCCTGCGTGCGCAGCTGGCCGACACCGAAGAAGATCACACCTACTGGCTTGAGAAGCAGCAGGGCCTGATCAAGGCCATCGGGCTGGAAAACTACCTGCAGTCGCAGATGTAAGTTATCCACAGACTCAAGTAAAAGCCCCTGGCACCATCGGTACCAGGGGCTTTTTCATTGCGCCGGCAATACTCAGGCCCTATCCCGCTCCAGCAATGGTTTCAGGTAATGGCCGGTATATGACTGCTTCATCTCGCTCAGCTCTTCTGGTGTACCGCAGGCAATGATCTGCCCACCCTTG > NC_002947/566474‑566772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |