Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 823,551 A→C 5.6% H352Q (CAT→CAG PP_0708 ← betaine‑aldehyde dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947823,5510AC 5.6% 690.1 / 20.8 205H352Q (CAT→CAGPP_0708betaine‑aldehyde dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (95/98);  new base C (5/7);  total (100/105)
Fisher's exact test for biased strand distribution p-value = 7.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 209 total aligned reads displayed.

ATTGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGTGCCGCCT  >  NC_002947/823404‑823699
                                                                                                                                                   |                                                                                                                                                    
aTTGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATg                                                                                                                                                    >  2:2239417/1‑150 (MQ=255)
aTTGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATg                                                                                                                                                    >  1:4191270/1‑150 (MQ=255)
aTTGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATg                                                                                                                                                    <  2:2623590/150‑1 (MQ=255)
 ttGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATgg                                                                                                                                                   >  2:1837744/1‑150 (MQ=255)
 ttGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATgg                                                                                                                                                   >  1:3614692/1‑150 (MQ=255)
  tGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGgc                                                                                                                                                  <  1:1102911/150‑1 (MQ=255)
      ttCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGgccgcc                                                                                                                                              >  2:5122490/1‑150 (MQ=255)
      ttCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGgccgcc                                                                                                                                              >  1:3558909/1‑150 (MQ=255)
      ttCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGgccgcc                                                                                                                                              >  2:450649/1‑150 (MQ=255)
      ttCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGgccgcc                                                                                                                                              >  1:2048383/1‑150 (MQ=255)
       tCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCgcca                                                                                                                                             <  1:1246964/150‑1 (MQ=255)
          gCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCgccagcc                                                                                                                                          >  2:2806558/1‑150 (MQ=255)
           cAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGCTTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCgccagcca                                                                                                                                         <  1:2530626/150‑1 (MQ=255)
           cAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCgccagcca                                                                                                                                         <  1:2701871/150‑1 (MQ=255)
           cAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCgccagcca                                                                                                                                         <  1:2701907/150‑1 (MQ=255)
               ggCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCa                                                                                                                                     <  2:3614692/150‑1 (MQ=255)
               ggCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCa                                                                                                                                     <  1:3104155/150‑1 (MQ=255)
                gCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCCTGGCTGGCGGCCATGCAc                                                                                                                                    <  2:3843988/150‑1 (MQ=255)
                gCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCAc                                                                                                                                    >  1:3371057/1‑150 (MQ=255)
                gCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCAc                                                                                                                                    >  2:4460515/1‑150 (MQ=255)
                 ccTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCCTGGCTGGCGGCCATGCACt                                                                                                                                   <  2:4014088/150‑1 (MQ=255)
                  cTGGTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACCGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTg                                                                                                                                  <  2:3399304/150‑1 (MQ=255)
                      tCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCaaa                                                                                                                              >  1:4134113/1‑150 (MQ=255)
                        cTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAAcc                                                                                                                            >  1:1543624/1‑150 (MQ=255)
                         tCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGGCGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACct                                                                                                                           >  2:499558/1‑150 (MQ=255)
                         tCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACct                                                                                                                           >  1:3534717/1‑150 (MQ=255)
                         tCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACct                                                                                                                           >  1:919654/1‑150 (MQ=255)
                             tGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACcttctt                                                                                                                       <  2:4105398/150‑1 (MQ=255)
                               gCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTcc                                                                                                                     >  1:3810302/1‑150 (MQ=255)
                                cAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTccc                                                                                                                    <  2:3005655/150‑1 (MQ=255)
                                 aaaGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCcg                                                                                                                   >  1:3960426/1‑150 (MQ=255)
                                 aaaGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCcg                                                                                                                   >  1:3024414/1‑150 (MQ=255)
                                        cGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTg                                                                                                            <  2:2366374/150‑1 (MQ=255)
                                             gcAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCaaa                                                                                                       <  2:4769324/150‑1 (MQ=255)
                                              cAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAg                                                                                                      >  2:5063519/1‑150 (MQ=255)
                                                    aCCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCGCATCGGTATACCGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTg                                                                                                <  2:70041/150‑1 (MQ=255)
                                                    aCCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCa                                                                                                                                                      <  2:790845/96‑1 (MQ=255)
                                                    aCCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCa                                                                                                                                                      >  1:790845/1‑96 (MQ=255)
                                                     ccGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTgg                                                                                               <  1:2864040/150‑1 (MQ=255)
                                                     ccGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTgg                                                                                               >  1:2135890/1‑150 (MQ=255)
                                                      cGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGc                                                                                              >  1:330084/1‑150 (MQ=255)
                                                         gCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCAc                                                                                           <  1:1837901/150‑1 (MQ=255)
                                                           cAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCt                                                                                         >  2:3570726/1‑150 (MQ=255)
                                                              aGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCCTGGCTGGCGGCCATGCACt                                                                                                                                   >  2:229128/1‑105 (MQ=255)
                                                              aGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCCTGGCTGGCGGCCATGCACt                                                                                                                                   <  1:229128/105‑1 (MQ=255)
                                                              aGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCa                                                                                      <  2:1195040/150‑1 (MQ=255)
                                                              aGATGTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCa                                                                                      <  1:1115626/150‑1 (MQ=255)
                                                                  ttCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCa                                                                                  >  2:2123206/1‑150 (MQ=255)
                                                                   tCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCAt                                                                                 >  2:3740120/1‑150 (MQ=255)
                                                                    ccTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCAtt                                                                                <  1:4017429/150‑1 (MQ=255)
                                                                           ccACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctg                                                                         >  2:1692470/1‑150 (MQ=255)
                                                                            cacaGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctgg                                                                        >  2:1113682/1‑150 (MQ=255)
                                                                            cacaGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctgg                                                                        >  1:1366489/1‑150 (MQ=255)
                                                                            cacaGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctgg                                                                        >  2:3219420/1‑150 (MQ=255)
                                                                             acaGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctggc                                                                       >  1:111716/1‑150 (MQ=255)
                                                                               aGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCctggctg                                                                     <  1:1328599/150‑1 (MQ=255)
                                                                                   ggcTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCa                                                                 <  1:478202/150‑1 (MQ=255)
                                                                                      tGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCg                                                              >  2:4792333/1‑150 (MQ=255)
                                                                                       gTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCgg                                                             <  2:1961058/150‑1 (MQ=255)
                                                                                       gTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCgg                                                             >  2:675939/1‑150 (MQ=255)
                                                                                          tttCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGcc                                                          >  1:2567052/1‑150 (MQ=255)
                                                                                           ttCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCGTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGccc                                                         <  2:3934875/150‑1 (MQ=255)
                                                                                              ggCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATg                                                      >  1:2885113/1‑150 (MQ=255)
                                                                                                cacaTCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTc                                                    <  2:4749909/150‑1 (MQ=255)
                                                                                                   aTCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGAc                                                 >  1:4521711/1‑150 (MQ=255)
                                                                                                   aTCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGAc                                                 >  2:464017/1‑150 (MQ=255)
                                                                                                   aTCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGAc                                                 >  2:3886832/1‑150 (MQ=255)
                                                                                                     cGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCGTCCCGCGCCGTGGCAAAGTAGCTGGCCCCCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGCCct                                               <  2:330084/150‑1 (MQ=255)
                                                                                                       gTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACctct                                             >  2:4595344/1‑150 (MQ=255)
                                                                                                        tataCAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGGGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCtt                                            <  2:4927947/150‑1 (MQ=255)
                                                                                                          taCAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCg                                          <  1:716835/150‑1 (MQ=255)
                                                                                                          taCAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCg                                          <  1:1896440/150‑1 (MQ=255)
                                                                                                          taCAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCg                                          <  1:4430254/150‑1 (MQ=255)
                                                                                                           aCAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCgg                                         <  2:2176862/150‑1 (MQ=255)
                                                                                                                gTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCaaa                                    <  2:1893590/150‑1 (MQ=255)
                                                                                                                gTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCaaa                                    >  1:1803328/1‑150 (MQ=255)
                                                                                                                    ggCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCg                                          >  2:3249964/1‑140 (MQ=255)
                                                                                                                    ggCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCg                                          <  1:3249964/140‑1 (MQ=255)
                                                                                                                      cTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTa                              >  2:2700952/1‑150 (MQ=255)
                                                                                                                        gACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacc                            >  2:14549/1‑150 (MQ=255)
                                                                                                                        gACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacc                            >  2:4013592/1‑150 (MQ=255)
                                                                                                                         aCGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacca                           <  2:3027808/150‑2 (MQ=255)
                                                                                                                           gAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacccac                         >  1:1191276/1‑150 (MQ=255)
                                                                                                                           gAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacccac                         >  1:1620480/1‑150 (MQ=255)
                                                                                                                           gAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTacccac                         >  2:2447498/1‑150 (MQ=255)
                                                                                                                              ccAGCCTTCACGGTCCAGTGCATGGCCTCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGACATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCg                      >  1:3045293/1‑150 (MQ=255)
                                                                                                                              ccAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCg                      >  1:1531278/1‑150 (MQ=255)
                                                                                                                                  ccTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAgg                  <  1:2123206/150‑1 (MQ=255)
                                                                                                                                   cTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGt                 <  1:1274837/150‑1 (MQ=255)
                                                                                                                                    ttCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCa                                                                                      >  1:4377749/1‑80 (MQ=255)
                                                                                                                                    ttCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCa                                                                                      <  2:4377749/80‑1 (MQ=255)
                                                                                                                                    ttCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGtt                >  2:2059597/1‑150 (MQ=255)
                                                                                                                                       aCGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTc             <  1:28005/150‑1 (MQ=255)
                                                                                                                                       aCGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTc             <  1:1970307/150‑1 (MQ=255)
                                                                                                                                         ggTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCa           <  2:4839944/150‑1 (MQ=255)
                                                                                                                                         ggTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCa           >  1:4477996/1‑150 (MQ=255)
                                                                                                                                           tCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGt         >  2:3618495/1‑150 (MQ=255)
                                                                                                                                             cAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGTgc       >  2:3789596/1‑150 (MQ=255)
                                                                                                                                              aGTGCCTGGCTGGCGGCCATGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGTgcc      >  1:1260848/1‑150 (MQ=255)
                                                                                                                                               gTGCCTGGCTGGCGGCCATGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGTgccg     >  1:234275/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
ATTGGCTTCGGCAATGGCCTGTTCCTCGGTGGCAAAGCGCCGTGCGCAGAGCACCGGGCCAAAGATTTCCTCGGTCCACAGGCGGCTGTCTTTCGGCACATCGGTATACAGCGTCGGGCTGACGAACCAGCCTTCACGGTCCAGTGCATGGCCGCCAGCCAGGCACTGCAAACCTTCTTCCCGCGCCGTGGCAAAGTAGCTGGCCACCTTCAGCCATTGCGCCTGGCTGGTCAGCGGGCCCATGTCGACCTCTTCGGTCAAAGGATTACCCACCCGCAGGTTTTCCAGTGCCGCCT  >  NC_002947/823404‑823699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: