| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 955,154 | G→A | 13.6% | intergenic (+105/‑208) | cyoE → / → alaC | protoheme IX farnesyltransferase/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 955,154 | 0 | G | A | 13.6% | 218.3 / 23.1 | 88 | intergenic (+105/‑208) | cyoE/alaC | protoheme IX farnesyltransferase/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (41/35); new base A (6/6); total (47/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.65e-01 | |||||||||||
CAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGC > NC_002947/955007‑955302 | cAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGtt < 1:2070262/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTc < 2:133775/150‑1 (MQ=255) aGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTc < 2:4143842/150‑1 (MQ=255) ccAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAAACCC‑CACCGAAAAgggtgct > 1:277785/1‑145 (MQ=255) cAGACCGCGGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTg < 1:3739314/150‑1 (MQ=255) aCCGCTGCGGATGTGCTGATGACCGACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAg < 1:1658699/150‑1 (MQ=255) ccGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAgg < 1:5030897/150‑1 (MQ=255) gCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTT‑CTGTGCTGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 1:2042945/150‑1 (MQ=25) cTGCGGATGTGCTGATGACCTACGCACGCTGAACCTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGc < 2:1370335/150‑1 (MQ=255) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 1:3727574/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 2:4927226/150‑1 (MQ=38) cTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGATTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGc < 2:3350669/150‑1 (MQ=38) cTGCGGACGCGCCGATGACCTCCGCACGCTGAACCTGCTGCCTGTGTCACGCACACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTCCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGGAGGAGc < 2:3772557/150‑1 (MQ=38) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCg < 2:2514490/150‑1 (MQ=255) tGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCGGTAGGAGCg > 2:1253158/1‑150 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCgg < 2:1575820/150‑1 (MQ=38) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 2:733155/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:4985418/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:4985368/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:4945882/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 2:1905101/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:4904020/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:4903550/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:379254/150‑1 (MQ=255) gCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCgg < 1:3791844/150‑1 (MQ=255) cGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAGGAACCTTGTAGGAGCggg < 2:4774467/150‑1 (MQ=38) gATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGtt < 2:142069/150‑1 (MQ=255) tgCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTAcc < 1:4175642/150‑1 (MQ=255) cTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CGCCTACAACGGTCCGGGAGGCGCGGGTTTACCcg > 1:3361374/1‑150 (MQ=39) tgatgaCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCcgc < 2:2987876/150‑1 (MQ=255) aCCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACACGGTTCCTGTAGGAGCGGGTTTACCCGCGAaga < 2:1681960/150‑1 (MQ=255) tccgcacgcTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCAGGGTGGCGGGTTTTTTTTTTGGGGGTATTTTTCCTGGGCGGGCCTCTGGGGGGGTAACCCCG‑CGCCTACACGGTGCCTGTTGGTGGGGGTTTACCCGCGAAGAGGc < 2:1296461/148‑1 (MQ=255) cacgcTGAAACTGCGGCCTGTTTCACGAAAACCCCGGCCAGTGTGCGGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGc < 2:3938417/150‑1 (MQ=37) tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCGGGAGGAGCGGGGTTACCCGCGGAGAGGGCAGCACAGa > 1:5076925/1‑150 (MQ=38) tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CGCCGAAAAGGGTGCGGTAGGAGCGGGGTTTCCCGCGCAGAGGCCCGcacaca > 2:3514616/1‑148 (MQ=38) tGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCATCGCGGGTTAAACCC‑CGACAAAAAGGGTGCAGGAGGTGCCGGGTTAGCCCCGGAGAGGGCCGcacacg > 2:1694098/1‑148 (MQ=255) ttCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCC‑CGCCTAAAAGGTTCCGGTAGGAGCGGGTTTTACCGCGAAGAGGCCAGCACCGAAAAAAAAAAATACCTg > 2:1585161/1‑150 (MQ=38) tCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCGGa > 2:2911537/1‑150 (MQ=255) aCGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTGGCGGGTTATACCG‑GTGCTTGAAGGTTGGTGTTGGTGCGGGTTTTTGCGGGTATTGGGGAGCGCAGTAAAATAAATATAGCTGttt > 2:4900372/1‑150 (MQ=255) cccGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCGACAAGGTTCCTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGTTTTTaaaaaa > 2:4466938/1‑150 (MQ=255) cccGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCC‑CTACTACAAGGTTCCGGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGCAAAATAAAAATAACAGATTTTCaaaaa > 2:3158818/1‑150 (MQ=37) ccGGCCACTGGGCCGGGTTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAACCCCG‑ATCCTACAAGGTTCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCaaaaaa < 2:1857297/150‑1 (MQ=38) cGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCACTTCGCGGGTAAACCCC‑CACCGAAAAGGGTCCGGGAGGAGCCGGTTTAACCGCGAAGAGGCCAGCCCCCAAAAAAAAAAATAACAGCATTTCAAAAAATAGATCTGaaaat > 2:232241/1‑149 (MQ=255) tttttttttttGGGGGTATTTTTCCTGTGCCGCCCTCTCCGC‑GGTAAACCCGCCCCCAACCAGGTACCTGCCGGAGGGGTTTCACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTc < 1:493559/148‑1 (MQ=255) tgtGGGGGTATTTTTCGTGTGCCGGCCTCTTCGGGGTAAAACCCG‑CTCCAACACGGTTCCTGTCGGCGGGGTTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATaaaa < 1:3514616/148‑1 (MQ=255) tGGGGTTATTTTACCTGGGCCGGCCTATACGCGGTTAAACCCG‑AACCTCCTAGGTTCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa < 1:1682387/150‑1 (MQ=38) tGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAACCCCG‑CTCCTACACGGTTCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACa < 1:1682563/150‑1 (MQ=255) tttttCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CGCCTACAAGGTTCCGGTAGGAGCGGGGTTACCCGCGCAGAGGCCCGCCCCGAAAAATAACAATACCTGATTTTCCAAAAATAGATCTGGAAAGGTCTAATAAAACAGGAAATTa > 2:4509919/1‑150 (MQ=37) tttCCTGTGCCGGCCTCTTCGCGGGTAAAACCC‑CCACAACAAGGTTCCGGTAGGGGCGGGTTTAACCCCCAACAGGCCAGCACACAAAAATAAAAAAAACAGATTTTAAAAAAATATATCAGAAAAGTTATAATAAAAAAAGAAAatata > 2:2306681/1‑149 (MQ=255) gCCTCTTCGCGGGTAAAACCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCACCACACAAAAATAAAAATACCAGATTTTCAAAAAATAGAACTGAAAAGTTCTAATAAAAAAGGAAAATATACTTTAAACGCaa > 2:3481814/1‑149 (MQ=25) ccTCTTCGCGGGGAAACCCG‑CTCCTACAAGGTTCCGGTAGGAGCGGGTTTACCCGCCAAGAGGCCACCACCGAAAAATAAAAATACCTGATTTTCCAAAAAAAGATCAGAAAAGTTCTAATAAAACAGGAAAGTATCCATTACAGGCagc > 2:3570135/1‑148 (MQ=37) tctTCGCGGGTTAAACCC‑CTCCTACCAGGTTCCGGGAGGAGCGGGTTTACCCGCGCAGAGGCCACCACAGAAAAATAAAAATACCTGATTTTGAAAAAATAGATCTGTAAAGTTCTAATAAAAAAGGAAATTATCCTTTAAAGGCCTccg > 2:2149008/1‑149 (MQ=255) gggTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAATACAGGAAATTATCCTTTACAGGCATCCTGTTTCgg > 2:4259579/1‑150 (MQ=255) gTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCa > 2:1792334/1‑150 (MQ=255) aCCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAt > 2:2455967/1‑150 (MQ=255) cccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:2538117/1‑150 (MQ=38) cccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:4220629/1‑150 (MQ=255) cccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtc > 1:4220623/1‑150 (MQ=255) cccG‑CTCCTACAAGGTTCCGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGTAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTGTCGGCACtctc > 2:2970779/1‑150 (MQ=255) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:2676055/1‑150 (MQ=38) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 2:2825586/1‑150 (MQ=38) ccG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:2554150/1‑150 (MQ=38) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:3809211/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:1716120/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:2059357/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:2413023/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:693247/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:4633831/1‑150 (MQ=255) ccG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtct > 1:3809204/1‑150 (MQ=255) cG‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGTCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGTAAATTATCCGTTACAGGCATCCTGTTTCGGCACTAtctt > 2:2620164/1‑150 (MQ=37) cG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTAtctt < 2:1716120/150‑1 (MQ=255) g‑CTCCTACAGGAACCTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCTCTAtcttc > 1:4690376/1‑150 (MQ=38) tCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTg > 2:663722/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGGGGTTTAACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt < 1:1505671/150‑1 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGaaaa > 2:259481/1‑89 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGaaaa < 1:259481/89‑1 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:1909286/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:2019522/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 2:919458/1‑150 (MQ=255) tACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTACAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGAtt > 1:4337191/1‑150 (MQ=255) aCAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc < 2:3361374/150‑1 (MQ=255) aCAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc < 2:2113430/150‑1 (MQ=255) aCAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc > 2:1818146/1‑150 (MQ=255) aCAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTc > 2:5023318/1‑150 (MQ=255) cAAGGTTCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa < 1:1253158/150‑1 (MQ=255) cAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 1:604120/1‑150 (MQ=255) cAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCa > 1:3643930/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:699870/1‑150 (MQ=255) aaGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAg > 1:3489271/1‑150 (MQ=255) ggTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGgc > 1:4887428/1‑150 (MQ=255) | CAGCCAGACCGCTGCGGATGTGCTGATGACCTACGCACGCTGAAACTGCTGCCTGTTTCACGAAAACCCCGGCCACTGTGCCGGGGTTTTTTTTTGGGGGTATTTTTCCTGTGCCGGCCTCTTCGCGGGTAAACCCG‑CTCCTACAAGGTTCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGAAAAATAAAAATACCTGATTTTCAAAAAATAGATCTGAAAAGTTCTAATAAAACAGGAAATTATCCTTTACAGGCATCCTGTTTCGGCACTATCTTCTGATTCAGGC > NC_002947/955007‑955302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |