| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,113,840 | T→A | 6.1% | intergenic (+30/+18) | hupN → / ← rlmF | DNA‑binding protein HU/ribosomal RNA large subunit methyltransferase F |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,113,840 | 0 | T | A | 6.1% | 349.2 / 7.2 | 109 | intergenic (+30/+18) | hupN/rlmF | DNA‑binding protein HU/ribosomal RNA large subunit methyltransferase F |
| Reads supporting (aligned to +/- strand): ref base T (52/50); new base A (5/2); total (57/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TCCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGA > NC_002947/1113691‑1113986 | tcCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCtt > 2:3331995/1‑150 (MQ=255)tcCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCtt < 1:1160068/150‑1 (MQ=255)tcCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCtt > 2:3331926/1‑150 (MQ=255)tcCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCtt < 2:3245051/150‑1 (MQ=255)tcCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCtt > 1:2947531/1‑150 (MQ=255)gccGAGCGTCCTGCCCGTACCGGCCGCAACCCTACGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTACTTGTTGCTTTGACGAAACCGCGCCCGGCtt > 1:1640532/2‑150 (MQ=255) aGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGccc < 2:4458366/150‑1 (MQ=255) gCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCg < 1:576149/150‑1 (MQ=255) cGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCgg < 1:1824390/150‑1 (MQ=255) gTCCTGCCCGTACCGGCCGCAACCCTTAGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCTCCCGTCTTGCCCggg < 2:1135677/150‑1 (MQ=255) tCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGgc > 2:142115/1‑150 (MQ=255) tGCCCGTACCGGCCACAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGcgcg < 1:3719970/150‑1 (MQ=255) aCCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGtttttt < 2:2376037/150‑1 (MQ=255) ccGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTc > 2:19022/1‑150 (MQ=255) cGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCGTGCCCGGGCGCGGTTTTTTCa > 1:1094970/1‑150 (MQ=255) ggCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCAt < 1:4597565/150‑1 (MQ=255) ggCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCAt < 1:1918668/150‑1 (MQ=255) gCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGGCAAGCCGGGCGCGGtttcgtcaaa < 2:3223606/150‑8 (MQ=38) gCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCt > 2:2483907/1‑150 (MQ=255) gCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCt < 1:4332764/150‑1 (MQ=255) cAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCtg > 1:555708/1‑150 (MQ=255) aCCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCtgtg > 1:2950670/1‑150 (MQ=255) cccTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGa < 2:3214299/150‑1 (MQ=255) ccgtCGACGGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGAt < 1:4346886/147‑1 (MQ=255) ccTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGAt > 1:2465658/1‑150 (MQ=255) cTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGAtt > 1:3931398/1‑150 (MQ=255) aCTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGc < 2:1830987/150‑1 (MQ=255) tGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAACGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTg < 2:1212363/150‑1 (MQ=255) tGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTg < 2:1914115/150‑1 (MQ=255) tGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTg > 2:1372086/1‑150 (MQ=255) ggCGCTGCCATCGAAATCGCTGCCAAGAAAGTTGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTgg < 1:5006279/150‑1 (MQ=255) gcgcTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTggg > 1:2396210/1‑150 (MQ=255) cTGCCATCGAAATCGCTGCCAAGCAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCACCAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCATGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGt < 2:2122426/150‑1 (MQ=255) cTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCATGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGt < 2:4694517/150‑1 (MQ=255) cTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGGTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCATGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGt < 2:4694427/150‑1 (MQ=255) aTCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAg > 1:4005339/1‑150 (MQ=255) aTCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAg > 1:890479/1‑150 (MQ=255) aTCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAg > 2:297086/1‑150 (MQ=255) tCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAgg > 2:4659534/1‑150 (MQ=255) aaTCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTg < 2:4576261/150‑1 (MQ=255) aaTCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTg < 1:2709799/150‑1 (MQ=255) aaTCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTg < 1:3681509/150‑1 (MQ=255) aaTCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTg < 1:2483907/150‑1 (MQ=255) tCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGc > 2:5007912/1‑150 (MQ=255) gCCAATAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTgcg < 1:543663/150‑1 (MQ=255) aaGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCCGGCTTGGCGTgcggcg > 2:3584551/1‑150 (MQ=255) aaGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTgcggcg > 2:2960366/1‑150 (MQ=255) aaGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTgcggcg > 1:369044/1‑150 (MQ=255) aGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTGCGCTGGGCGTGCCAGGCTTGGCGTGCGGcgt > 1:3411302/1‑150 (MQ=255) gAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGcgtc < 1:4633289/150‑1 (MQ=255) gAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGcgtc < 1:3220590/150‑1 (MQ=255) aaaGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGcgtcg > 2:3595825/1‑150 (MQ=255) gtcAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAgg > 2:4632066/1‑150 (MQ=255) ttcgttcCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCTGCGTCGTCAAGGAAtctc < 2:2053975/150‑1 (MQ=255) ttcgttcCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTc > 2:3968847/1‑150 (MQ=255) cgttcCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCa < 1:1117312/150‑1 (MQ=255) tcCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGc < 1:1251630/150‑1 (MQ=255) aGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGAc > 1:5105576/1‑150 (MQ=255) aaGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGc < 1:2867248/150‑1 (MQ=255) gCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGct < 1:5007912/150‑1 (MQ=255) cTGACCGACGCCATCAACAAGTACTTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGctc < 2:1263478/150‑1 (MQ=255) cTGACCGACGCCATCAACAAGTAATTGTTGCTTTGCCGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGctc < 2:1263686/150‑1 (MQ=255) tGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGctct > 2:2588807/1‑150 (MQ=255) tGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTACAGGCGACCATGCGGctct > 2:3019216/1‑150 (MQ=255) gACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTg > 2:4261172/1‑150 (MQ=255) aCCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGt < 2:1888940/150‑1 (MQ=255) cGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGttt < 1:3600815/150‑1 (MQ=255) cGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGttt > 2:2056210/1‑150 (MQ=255) cGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGttt > 1:4383472/1‑150 (MQ=255) gACGCCATCAACAAGTACTTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTc < 2:4890006/150‑1 (MQ=255) gACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTc > 2:4350336/1‑150 (MQ=255) aCGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCCTGCGGCGTCGACAAGGAAGCTCCAGGCGACCATGCCGCTCAGTTTCt > 2:3105284/1‑150 (MQ=255) aacaaGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTgg > 2:4664033/1‑150 (MQ=255) aacaaGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTgg < 2:3399463/150‑1 (MQ=255) aaGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGccc > 1:5103804/1‑150 (MQ=255) aGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCa > 2:4540871/1‑150 (MQ=255) aaTTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTAAGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCAtct > 1:4772576/1‑150 (MQ=255) nttgCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCCGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAat > 1:2430817/2‑150 (MQ=255) gtttCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAat < 2:4285160/150‑1 (MQ=255) gttgCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAat < 2:641734/150‑1 (MQ=255) gttgCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAat > 1:2759972/1‑150 (MQ=255) ttgCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCGGGCCCATCTCAatg > 1:128923/1‑150 (MQ=255) tgCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAatga < 2:1057475/150‑1 (MQ=255) gCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAatgat < 1:905756/150‑1 (MQ=255) gCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAatgat < 1:905596/150‑1 (MQ=255) tttGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGc > 2:594873/1‑150 (MQ=255) atgaaaaaaCCGCGCCCGGGCAAGCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCg > 1:3373008/7‑150 (MQ=39) gaaaaaaCCGCGCCCGGGCAAGCCGGGCGCGGTTTTTTAATGGCTGTGTTTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGGCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTa > 1:3540600/5‑150 (MQ=255) aaaaaaCCGCGCCCGGGCAAGCCGGGCGCGGTTTTTTCATGCCGGTGATTTACGCTGGGCGTGCCAGGCTTTGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTAc > 1:4041777/4‑150 (MQ=255) aaaaCCGCGCCCGGGCAAGCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACgg > 2:5001182/2‑150 (MQ=255) aaaaCCGCGCCCGGGCAAGCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACgg > 1:3358481/2‑150 (MQ=255) ccGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCtt < 1:2065182/150‑1 (MQ=255) cgcgCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCAtc < 1:1015269/129‑1 (MQ=255) cgcgCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCAtc > 2:1015269/1‑129 (MQ=255) cgcgCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTg > 1:341997/1‑150 (MQ=255) cgcgCCCGGCTTGCCCGGGCGCGGTTTTGTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCtgg > 2:1057777/1‑148 (MQ=255) cgcCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGgc < 2:2947531/150‑1 (MQ=255) gcCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGgcg > 1:3848862/1‑150 (MQ=255) ccGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGcc > 1:3126777/1‑150 (MQ=255) cGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCg > 2:4997006/1‑150 (MQ=255) | TCCGAGCGTCCTGCCCGTACCGGCCGCAACCCTTCGACTGGCGCTGCCATCGAAATCGCTGCCAAGAAAGTCGTCAAGTTCGTTCCAGCCAAAGTGCTGACCGACGCCATCAACAAGTAATTGTTGCTTTGACGAAACCGCGCCCGGCTTGCCCGGGCGCGGTTTTTTCATGCCTGTGATTTACGCTGGGCGTGCCAGGCTTGGCGTGCGGCGTCGTCAAGGAAGCTCCAGGCGACCATGCGGCTCTGTTTCTGCCCCTGGCCCATCTCAATGATGCGTACGGCCTTGGCGCCGGA > NC_002947/1113691‑1113986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |