| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,380,729 | T→A | 5.2% | intergenic (‑111/+24) | PP_t67 ← / ← PP_t66 | tRNA‑Met/tRNA‑Met |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,380,729 | 0 | T | A | 5.2% | 438.0 / 10.4 | 134 | intergenic (‑111/+24) | PP_t67/PP_t66 | tRNA‑Met/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base T (69/58); new base A (3/4); total (72/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
Only 100 of 136 total aligned reads displayed.
TATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGC > NC_002947/1380581‑1380878 | tGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTaa < 1:1686600/150‑1 (MQ=255) cccGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGt < 1:3542456/150‑1 (MQ=255) ccGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTg < 2:672681/150‑1 (MQ=255) ccGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTg < 2:4245204/150‑1 (MQ=255) gacgaGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTTAACACAGTGGc < 1:4618367/150‑1 (MQ=255) gacgaGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGc < 2:3060057/150‑1 (MQ=255) gacgaGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGc < 2:4940203/150‑1 (MQ=255) gacgaGCTACCAGACTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGc < 1:2337834/150‑1 (MQ=255) cTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTc < 2:1962361/150‑1 (MQ=255) aCCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTCCAGTGTGTGGTTTGTATGTCAAGCGCTCGGCTTTGATTGTTCGACG‑TTCTTTCGCGAATGCTTATCAGCAGGCAACGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCtt < 1:758675/150‑1 (MQ=18) ccAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTg > 1:1454469/1‑150 (MQ=255) cAGGCTGCTCCCTCCCGCGTCAGTGGGGCAGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGa < 2:3541012/150‑1 (MQ=255) cAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGGGTGTGGTTGGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTGTTTCGAGAAAGCTTATAATCAGGAAAATAAAAGCACCATTGTGTTAACAGTTGACTTTTATTGa > 1:2374243/1‑150 (MQ=14) aGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGaa > 1:3961722/1‑150 (MQ=255) ggCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAAt > 1:3771661/1‑150 (MQ=255) ctgctCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCt < 1:4505489/150‑1 (MQ=255) tgctCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTg < 1:3647421/150‑1 (MQ=255) gctCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTgg < 1:1883909/150‑1 (MQ=255) gctCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTgg < 1:837193/150‑1 (MQ=255) tCCATCCCGCGTCAGTGGGGCGGATTCTACAGGGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGtt > 1:2914472/1‑150 (MQ=255) ccATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGAGG‑TTTTTTCTCGAATGATTATCAGCAGGCAAAGAAAAAGTCCACTGTGTAAAAAGTGGCATGTTCTTGAATCTGGTTg > 1:1151517/1‑150 (MQ=18) cATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCCGGCGAAGAAAAAGGCCACTGTGTTAACAGTGGACTTTTCTTGGATCTGGTTga > 2:3287061/1‑149 (MQ=255) tCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCgg < 2:2983324/150‑1 (MQ=255) tCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCgg < 1:3150850/150‑1 (MQ=255) ccGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGa < 2:4138858/150‑1 (MQ=255) cAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGa < 1:3796290/150‑1 (MQ=255) aGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCACGCGCTAGGCTTTGATTTTTCGACG‑GTTTTGCGCGATGGCTTATCAGCAGGCACCGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGAt < 1:4543822/150‑1 (MQ=18) aGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGACACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGAt > 1:2852663/1‑150 (MQ=255) gTGGGGCGGATTCTACATTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGAtt < 1:2299102/150‑1 (MQ=255) ggCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGaa > 2:4768450/1‑150 (MQ=255) gCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAAc < 1:2499807/150‑1 (MQ=255) gATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACcga < 2:4066620/150‑1 (MQ=255) aTTCTACAGTTTGTGGTTTGTATGTCAAGCTCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACTGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACcgac < 2:4850452/150‑1 (MQ=255) ttCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGTTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGACGGATTTGAACcgacg > 2:2021041/1‑150 (MQ=255) ttCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTTGTTGCGGGAGCCGGATTTGAAacgacg > 2:1768670/1‑150 (MQ=255) ttCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACcgacg > 1:3963708/1‑150 (MQ=255) tACAGTGTGTGGTTTGTATGTCAAGCGCTAGGGTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGTAAAAGGCCACTGTGTTAACAGTGGGCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAAGCGACGAcc > 2:1995529/1‑150 (MQ=255) tACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGAcc > 2:74046/1‑150 (MQ=255) gtgtgtGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCg < 1:404448/150‑1 (MQ=255) tgtgtgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAATAGGCCACTGTGTTAAGAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCgg < 2:2644842/150‑1 (MQ=255) tgtgtgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCgg < 1:74046/150‑1 (MQ=255) gtgtgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCggg < 2:3483906/150‑1 (MQ=255) gtgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGtt > 1:503290/1‑150 (MQ=255) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTTAACACAGTGGc > 2:3798148/1‑96 (MQ=21) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTTAACACAGTGGc > 2:3797888/1‑96 (MQ=21) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTTAACACAGTGGc < 1:3797888/96‑1 (MQ=21) tgGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTa > 1:3060301/1‑150 (MQ=255) ggTTTGTATGTCAAGCGCTATGCTTTGATTTTTCGACG‑TTTTTTCGCGATTGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGGGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt < 2:550532/150‑1 (MQ=255) ggTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt < 2:4309829/150‑1 (MQ=255) gTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTTTTAACAGTGGCCTTTTATTTAATCTGGTTGCGGGAGCAGGATTTGAAACTAAGACCTTCGGGTTATg > 2:2990082/1‑150 (MQ=18) gTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATg > 2:2990012/1‑150 (MQ=255) gTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATg > 1:2064651/1‑150 (MQ=255) tttGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGa < 1:3330718/150‑1 (MQ=255) tATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAATGGCCACTGAGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGccc > 2:4042558/1‑150 (MQ=255) gTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac > 1:854217/1‑150 (MQ=255) tCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacg > 2:1144293/1‑150 (MQ=255) tCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacg > 1:3053246/1‑150 (MQ=255) aaGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAg > 2:2311249/1‑150 (MQ=255) gcTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGACTGCTTATCAGAAGTCAAATAAAATGGCCTCTGTGTTAACAGTGGCCTTTTGTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAc < 2:2518377/150‑1 (MQ=17) gcTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAc > 2:1740484/1‑150 (MQ=255) cTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAcc > 1:2706803/1‑150 (MQ=255) cTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAcc > 1:1620541/1‑150 (MQ=255) ggCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAgg < 2:751025/150‑1 (MQ=255) tttGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAATTGGCCACTGTGTTAACAGTGGCGTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctg > 2:1357348/1‑150 (MQ=255) tttGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctg > 1:3507284/1‑150 (MQ=255) ttGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctgc > 1:2661527/1‑150 (MQ=255) gATTTTTCGACGTTTTTTTCGCGACTGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGgctgct < 2:3624188/150‑1 (MQ=255) tCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATccc > 1:795684/1‑150 (MQ=255) gACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGAAGCTACATCCcgc > 1:3226612/1‑150 (MQ=255) aCG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgcg > 1:2024530/1‑150 (MQ=255) tttCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTg > 2:138578/1‑150 (MQ=255) tttCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGGGTTAACAGTGGCCTTTTCTGGAATCTGGATCCGTGGGGCGGAGTTGAACGGAAGACCTTCGGGATCTGAGCCCGACGAGCTGCCGGGCTGCTCCTTCCCGCGTcgggg > 2:138563/1‑146 (MQ=255) gcgAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCTGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGc < 2:4351723/150‑1 (MQ=255) gCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTc < 2:3150588/150‑1 (MQ=255) ttATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga < 2:4513313/108‑1 (MQ=255) ttATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga > 1:4513313/1‑108 (MQ=255) aTCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACa < 2:3961722/150‑1 (MQ=255) tCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAg > 2:2670988/1‑150 (MQ=255) agcagGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt < 1:1015804/92‑1 (MQ=255) agcagGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 2:1015804/1‑92 (MQ=255) gcagGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCgg < 2:4647786/65‑1 (MQ=255) gcagGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCgg > 1:4647786/1‑65 (MQ=255) gcagGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCgt > 2:4508306/1‑150 (MQ=255) gCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 1:1891459/1‑87 (MQ=38) gCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGGTAAGACCCCGACGAGCAACCGGGCTGCGCCATCCCGCGTCAGTGGGGCGGAGTCGACGGCGTGGAg > 2:3573655/1‑150 (MQ=14) cAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGAttt > 2:2647221/1‑64 (MQ=255) cAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga > 1:1649991/1‑97 (MQ=37) aaaGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgacga > 2:4950889/1‑96 (MQ=37) aaaGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCa > 2:1624539/1‑103 (MQ=35) aagaaaaGGCCACTGTTAACACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTta > 1:2877763/4‑150 (MQ=17) aGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTta < 2:1454469/150‑1 (MQ=255) aaaGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGa > 2:5085700/1‑54 (MQ=255) aaGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACcgac > 1:1653222/1‑64 (MQ=40) aaGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac > 2:3480753/1‑87 (MQ=38) aGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgcgcc < 2:1595853/114‑3 (MQ=18) aGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCcgcgcc > 1:1595853/1‑112 (MQ=18) ggCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCcgac > 1:1952776/1‑85 (MQ=38) gCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGa > 2:4586887/1‑77 (MQ=39) aCTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTAt > 1:1173630/1‑72 (MQ=39) ttAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGc > 2:1672343/1‑150 (MQ=255) | TATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGTGTGTGGTTTGTATGTCAAGCGCTAGGCTTTGATTTTTCGACG‑TTTTTTCGCGAATGCTTATCAGCAGGCAAAGAAAAAGGCCACTGTGTTAACAGTGGCCTTTTCTTGAATCTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCATCCCGCGTCAGTGGGGCGGATTCTACAGCGTGTAGTTTATATGTCAAGCGCTAGGC > NC_002947/1380581‑1380878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |