Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,458,128 C→A 8.4% intergenic (+21/+19) PP_1276 → / ← algA hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,458,1280CA 8.4% 422.5 / 21.9 131intergenic (+21/+19)PP_1276/algAhypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
Reads supporting (aligned to +/- strand):  ref base C (62/58);  new base A (5/6);  total (67/64)
Fisher's exact test for biased strand distribution p-value = 7.60e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01

Only 100 of 140 total aligned reads displayed.

CTCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGATCTCCAGCG  >  NC_002947/1457979‑1458277
                                                                                                                                                     |                                                                                                                                                     
cTCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGc                                                                                                                                                       <  1:2841686/150‑1 (MQ=255)
 tCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGcc                                                                                                                                                      >  1:3213779/1‑150 (MQ=255)
 tCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGcc                                                                                                                                                      >  2:2942209/1‑150 (MQ=255)
 tCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGcc                                                                                                                                                      >  2:260446/1‑150 (MQ=255)
   gAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCa                                                                                                                                                    >  1:2705804/1‑150 (MQ=255)
   gAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCa                                                                                                                                                    >  1:2502910/1‑150 (MQ=255)
     aaTGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAgg                                                                                                                                                  <  1:1488343/150‑1 (MQ=255)
      aTGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTAAGCCCAggg                                                                                                                                                 <  1:360828/150‑1 (MQ=255)
         aCTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGCAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGGCTGACCAGGGGCg                                                                                                                                              <  2:817871/150‑1 (MQ=255)
          cTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGGCTGACCAGGGGCGa                                                                                                                                             <  1:1628360/150‑1 (MQ=255)
          cTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGGCTGACCAGGGGCGa                                                                                                                                             <  1:2608408/150‑1 (MQ=255)
          cTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGGCTGACCAGGGGCGa                                                                                                                                             <  1:415446/150‑1 (MQ=255)
          cTGCCACAAGCAACAGGGCTGAATCCTTCGAATGGGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGGCTGACCAGGGGCGa                                                                                                                                             <  2:4380477/150‑1 (MQ=255)
           tGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAg                                                                                                                                            >  2:255207/1‑150 (MQ=255)
            gCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGt                                                                                                                                           <  2:3350468/150‑1 (MQ=255)
             ccACAAGCATCAGGGCTGAATCGTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTGAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCGCGTGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTc                                                                                                                                          >  2:1332596/1‑150 (MQ=255)
             ccACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTc                                                                                                                                          >  1:4279067/1‑150 (MQ=255)
              cacaAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCa                                                                                                                                         >  1:4315257/1‑150 (MQ=255)
               acaAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAg                                                                                                                                        >  2:3083036/1‑150 (MQ=255)
               acaAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAg                                                                                                                                        >  2:3402943/1‑150 (MQ=255)
                     aTCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTAc                                                                                                                                 >  1:4885896/1‑150 (MQ=255)
                      tCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTAc                                                                                                                                 <  1:2019060/150‑1 (MQ=255)
                      tCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTAc                                                                                                                                 <  2:2463401/150‑1 (MQ=255)
                      tCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTAc                                                                                                                                 <  2:2463268/150‑1 (MQ=255)
                      tCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTAc                                                                                                                                 >  1:78028/1‑150 (MQ=255)
                               aaTCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATg                                                                                                                        <  1:2635780/150‑1 (MQ=255)
                                   cTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCt                                                                                                                    >  1:3375723/1‑150 (MQ=255)
                                    ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCtt                                                                                                                   >  2:3949242/1‑150 (MQ=255)
                                    ttCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCtt                                                                                                                   >  1:2385885/1‑150 (MQ=255)
                                    ttCGAATTTGAAGGGGAGGAAGATTTGCAGAGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCAGAGCGTAGAATAAGCAGGCTCGCCCATGGTCAGCCCAGGGGCGAGTCAGCAATTACTGCTCGATCGACtt                                                                                                                   >  2:4317293/1‑150 (MQ=255)
                                     tCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTc                                                                                                                  >  1:2412658/1‑150 (MQ=255)
                                       gAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCAc                                                                                                                <  2:2046072/150‑1 (MQ=255)
                                                ggggAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAAcgcc                                                                                                       >  1:4968851/1‑150 (MQ=255)
                                                         gatTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGAt                                                                                              >  1:1462515/1‑150 (MQ=255)
                                                         gatTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGAt                                                                                              >  1:1273387/1‑150 (MQ=255)
                                                            ttGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATggg                                                                                           >  2:940365/1‑150 (MQ=255)
                                                            ttGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATggg                                                                                           >  2:3419155/1‑150 (MQ=255)
                                                            ttGCAGCGACCCTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATggg                                                                                           >  2:112260/1‑150 (MQ=255)
                                                             tGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATgggg                                                                                          <  2:945233/150‑1 (MQ=255)
                                                               cAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGt                                                                                        <  1:778719/150‑1 (MQ=255)
                                                                aGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTg                                                                                       >  2:4121809/1‑150 (MQ=255)
                                                                aGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTg                                                                                       >  2:122130/1‑150 (MQ=255)
                                                                 gCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTgg                                                                                      >  2:4143007/1‑150 (MQ=255)
                                                                 gCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTgg                                                                                      <  1:948720/150‑1 (MQ=255)
                                                                   gACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGAc                                                                                    <  2:4511813/150‑1 (MQ=255)
                                                                       tttCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTgc                                                                                >  1:3767698/1‑150 (MQ=255)
                                                                       tttCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTgc                                                                                <  1:3515584/150‑1 (MQ=255)
                                                                       tttCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTgc                                                                                >  1:3287401/1‑150 (MQ=255)
                                                                       tttCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTgc                                                                                >  1:53324/1‑150 (MQ=255)
                                                                         tCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTgcgc                                                                              <  1:410260/150‑1 (MQ=255)
                                                                              gtggtgGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATa                                                                         <  2:4315257/150‑1 (MQ=255)
                                                                              gtggtgGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATa                                                                         <  2:4735806/150‑1 (MQ=255)
                                                                               tggtggGTGGCCAATTAGACTTCTTCGTCATAGCCCCGAGGGTTGAATAAGCAGGCTCGCCCGTGGTCAGCCCAGGGGCGAGTAAGCATTTACTGCGGGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATac                                                                        <  2:1464732/150‑1 (MQ=255)
                                                                                    ggtggCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATc                                                                   >  1:4435578/1‑150 (MQ=255)
                                                                                      tggCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCt                                                                 >  2:4059764/1‑150 (MQ=255)
                                                                                       ggCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTc                                                                <  1:1344192/150‑1 (MQ=255)
                                                                                          ccATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa                                                             <  2:437187/150‑1 (MQ=255)
                                                                                          ccATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa                                                             <  2:634966/150‑1 (MQ=255)
                                                                                          ccATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa                                                             <  2:2730511/150‑1 (MQ=255)
                                                                                          ccATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGaa                                                             >  1:1292349/1‑150 (MQ=255)
                                                                                               cGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCt                                                        >  2:3153654/1‑150 (MQ=255)
                                                                                                 aCATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACCTCCTCGAAGCGCTCg                                                      >  2:4149191/1‑150 (MQ=255)
                                                                                                 aCATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCg                                                      >  1:1139891/1‑150 (MQ=255)
                                                                                                   aTCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGAt                                                    <  2:1204726/150‑1 (MQ=255)
                                                                                                   aTCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGAt                                                    <  2:2174743/150‑1 (MQ=255)
                                                                                                   aTCTACGACATAGCACCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGAGATGGTCTTCACCGAAAAGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGAt                                                    >  2:152152/1‑150 (MQ=255)
                                                                                                    gttagagcATAGCCCCGAGCGATGAATAAGCAGCCTCGCCCCTCGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATCGACTTCACCGAAACGCCGCGCTCGATGGCGGTGGACGTGCGCCCATACACATCCTCGAAGCGCACGATg                                                   <  2:3203528/143‑1 (MQ=255)
                                                                                                          tCAGAGCCCCGAGCGTTGAAGAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATcc                                             <  1:3722379/150‑1 (MQ=255)
                                                                                                            aTAGCCCCGATCTTTGAATAAGCATGCTCGCACCTGGTCAGCCCAGTGGCGAGTCTGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCTCTCGATGGGGGTGGACGTGCGCCCATACTCATCCTCGAAGAGCTCGATGTCATCCTc                                           <  1:1663735/150‑1 (MQ=255)
                                                                                                                    gAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCAGACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGt                                   <  2:4075920/150‑1 (MQ=255)
                                                                                                                     aGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTa                                  <  2:79352/150‑1 (MQ=255)
                                                                                                                        gTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCt                               >  1:4008872/1‑150 (MQ=255)
                                                                                                                           gAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTccc                            <  2:2590992/150‑1 (MQ=255)
                                                                                                                           gAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTccc                            >  1:4468877/1‑150 (MQ=255)
                                                                                                                            aaTAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCg                           <  2:1273387/150‑1 (MQ=255)
                                                                                                                            aaTAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCg                           >  1:2855145/1‑150 (MQ=255)
                                                                                                                              tAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGa                         >  1:607150/1‑150 (MQ=255)
                                                                                                                              tAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGa                         >  1:3228141/1‑150 (MQ=255)
                                                                                                                                    ggCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCAc                   <  2:2366753/150‑1 (MQ=255)
                                                                                                                                     gCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCAcc                  <  2:2705804/150‑1 (MQ=255)
                                                                                                                                     gCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCAcc                  >  2:2639930/1‑150 (MQ=255)
                                                                                                                                       tCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTc                >  1:4540521/1‑150 (MQ=255)
                                                                                                                                       tCGCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCg                                                      <  1:3133072/112‑1 (MQ=255)
                                                                                                                                       tCGCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTc                >  2:2313482/1‑150 (MQ=255)
                                                                                                                                       tCGCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTc                >  1:665550/1‑150 (MQ=255)
                                                                                                                                       tCGCCCCTGGGCTGACCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTc                >  1:4966191/1‑150 (MQ=255)
                                                                                                                                         gCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCga              <  2:4309850/150‑1 (MQ=255)
                                                                                                                                          ccccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgat             >  1:1893139/1‑150 (MQ=255)
                                                                                                                                          ccccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgat             <  2:3213779/150‑1 (MQ=255)
                                                                                                                                           cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGTGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgatg            <  1:273689/150‑1 (MQ=255)
                                                                                                                                           cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgatg            >  2:3632233/1‑150 (MQ=255)
                                                                                                                                           cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgatg            >  2:2537892/1‑150 (MQ=255)
                                                                                                                                           cccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgatg            >  2:2537758/1‑150 (MQ=255)
                                                                                                                                            ccTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCgatga           >  2:2465904/1‑150 (MQ=255)
                                                                                                                                              tGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGAtc         <  1:3402943/150‑1 (MQ=255)
                                                                                                                                                gTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGAtctc       <  2:2353954/150‑1 (MQ=255)
                                                                                                                                                gTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGAtctc       >  1:4510994/1‑150 (MQ=255)
                                                                                                                                                 tCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGATCTcc      >  1:4380491/1‑150 (MQ=255)
                                                                                                                                                    gCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGATCTCCAGc   >  1:3726226/1‑150 (MQ=255)
                                                                                                                                                     cccAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGATCTCCAGCg  >  2:1365198/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CTCGAAATGACTGCCACAAGCATCAGGGCTGAATCCTTCGAATTTGAAGGGGAGGATGATTTGCAGCGACCTTTCAGGGTGGTGGGTGGCCCATTCGACATCTACGTCATAGCCCCGAGCGTTGAATAAGCAGGCTCGCCCCTGGTCAGCCCAGGGGCGAGTCAGCATTTACTGCGCGATGGTCTTCACCGAAACGCCGCGCTCGATGGGGGTGGACGTGCGCCCATACACATCCTCGAAGCGCTCGATGTCATCCTCGCCCAGGTAGCTCCCGGACTGCACCTCGATGATCTCCAGCG  >  NC_002947/1457979‑1458277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: