mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 253 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6141536 | 141 (0.930) | 5 (0.030) | 3/274 | NT | 3.2% | coding (763/1473 nt) | cusB | CzcB family copper RND transporter membrane fusion protein |
| ? | NC_002947 | = 6141583 | 165 (1.090) | coding (810/1473 nt) | cusB | CzcB family copper RND transporter membrane fusion protein | |||||
| * | ? | NC_002947 | = 6064950 | 169 (1.110) | 3 (0.020) | 3/266 | NT | 1.7% | intergenic (‑85/‑140) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase |
| ? | NC_002947 | = 6064982 | 180 (1.230) | intergenic (‑117/‑108) | rubA/ubiC | rubredoxin‑1/chorismate pyruvate‑lyase | |||||
| * | ? | NC_002947 | = 6057130 | 90 (0.590) | 3 (0.020) | 3/260 | NT | 3.4% | coding (105/732 nt) | tonB | TonB energy transducing system subunit TonB |
| ? | NC_002947 | = 6057170 | 88 (0.610) | coding (145/732 nt) | tonB | TonB energy transducing system subunit TonB | |||||
| * | ? | NC_002947 | 6050598 = | 170 (1.120) | 5 (0.040) | 4/258 | NT | 3.0% | intergenic (+45/‑196) | PP_5300/rpoZ | LysR family transcriptional regulator/DNA‑directed RNA polymerase subunit omega |
| ? | NC_002947 | 6050660 = | 166 (1.170) | intergenic (+107/‑134) | PP_5300/rpoZ | LysR family transcriptional regulator/DNA‑directed RNA polymerase subunit omega | |||||
| * | ? | NC_002947 | = 6037054 | 170 (1.120) | 5 (0.030) | 4/270 | NT | 2.8% | coding (182/456 nt) | dut | deoxyuridine 5'‑triphosphate nucleotidohydrolase |
| ? | NC_002947 | = 6037090 | 177 (1.190) | coding (218/456 nt) | dut | deoxyuridine 5'‑triphosphate nucleotidohydrolase | |||||
| * | ? | NC_002947 | = 6034180 | 151 (0.990) | 5 (0.030) | 5/266 | NT | 3.2% | coding (1056/1590 nt) | dppA‑IV | dipeptide transport protein |
| ? | NC_002947 | = 6034213 | 159 (1.080) | coding (1089/1590 nt) | dppA‑IV | dipeptide transport protein | |||||
| * | ? | NC_002947 | = 5999686 | 174 (1.140) | 3 (0.020) | 3/266 | NT | 1.7% | coding (342/819 nt) | PP_5253 | arylesterase |
| ? | NC_002947 | = 5999707 | 184 (1.250) | coding (321/819 nt) | PP_5253 | arylesterase | |||||
| * | ? | NC_002947 | 5996863 = | 160 (1.050) | 6 (0.040) | 4/264 | NT | 3.8% | intergenic (+13/+164) | PP_5251/PP_5252 | transporter/hypothetical protein |
| ? | NC_002947 | 5996968 = | 150 (1.030) | intergenic (+118/+59) | PP_5251/PP_5252 | transporter/hypothetical protein | |||||
| * | ? | NC_002947 | 5994271 = | 181 (1.190) | 4 (0.030) | 4/254 | NT | 2.5% | coding (284/1263 nt) | opdB | proline‑specific outer membrane porin D |
| ? | NC_002947 | 5994341 = | 143 (1.020) | coding (354/1263 nt) | opdB | proline‑specific outer membrane porin D | |||||
| * | ? | NC_002947 | 5980959 = | 157 (1.030) | 3 (0.020) | 3/270 | NT | 1.9% | coding (136/993 nt) | PP_5241 | LuxR family transcriptional regulator |
| ? | NC_002947 | 5981001 = | 160 (1.070) | coding (94/993 nt) | PP_5241 | LuxR family transcriptional regulator | |||||