New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5203537	201 (0.580)	48 (0.140)	37/290	15.1	23.1%	intergenic (‑53/‑127)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5203636 =	122 (0.360)					intergenic (‑152/‑28)	PP_4582/PP_4583	membrane protein/putative Peptidase
Rejected: Coverage evenness skew score above cutoff.

TCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5203394‑5203537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTAC  >  NC_002947/5203636‑5203783                                                                                                                                                                                                                                                                                                      TCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGG                                                                                                                                                 <  1:110480/149‑1   CAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCA                                                                                                                                               <  2:4562660/149‑1    cGCCGGTGAGCTTTAACCCCACCACCAGGCCCCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGAAAGCAAGGCAAATAGAGGCCTATGATAAACACTTTTCCGGGCACAGGCAA                                                                                                                                              <  1:831590/148‑1             GCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCA                                                                                                                                     <  2:1758134/149‑1                     CCCACCAGCAGCCACCCTAAGGCGTCTACTGCGTACAAGCCCCTGGCGATGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAATAGATGCCTTTTATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCT                                                                                                                             <  2:2564217/149‑1                         cctgaAGGCACCATACGGCGGGTACTTCGTACAAGCCCCAGGCGTTGGTGTAGTCGTTCTCGGTCATGTTTTTCGTGCACGCCAGGCAAAGCGATGCGTTTGATACACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAA                                                                                                                         <  2:3196013/144‑1                         cctGCAGGCACCCTACGGCGGCTACTGCTTACTTGCCCCTGGCGATGGTGTAGTCGTTCTCGGTCATGGTTTTCGTGCAAGCCAGGCATAGTGATGCCTTTGATAAACTCTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAA                                                                                                                         <  2:3294865/146‑1                         CCAGCAGGCACCCTACGGCGGCTACTGCGTACATGCCCCAGGCGACGGTGTAGTCGTTCTCGGTCTTGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAACCACTTTGCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAA                                                                                                                         <  2:3294902/149‑1                              AGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCA                                                                                                                    <  2:5212263/149‑1                                     CTAAGGCGGCTACTGCTTACATGCCCCTGGCGATGGTGTAGTGGTTCTCGGTCTTGGTTTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACTCTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGC                                                                                                             <  2:1465616/149‑1                                      TAAGGCGGCTACTGCGTACTAGCCCCTGGCGACGGTGTAGTCGTTCTCGGTCTTGGTGTTCGTGCAAGCCTGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCC                                                                                                            <  2:4765087/149‑1                                      TAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCC                                                                                                            <  2:5484682/149‑1                                                   GCGTACAAGCCCCTGGCGTAGGTGTAGTCGTTCTCGGTCATGGTTTTCGTGCAAGCCAGTCAATTATATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATT                                                                                               <  2:3964427/149‑1                                                   GCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATT                                                                                               <  1:4276072/149‑1                                                      TACAAGCCCCAGGCGATGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATTATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCC                                                                                            <  2:1533328/149‑1                                                         AAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAA                                                                                         <  2:503051/149‑1                                                          cGCCCCTGGCGATGTTGTAGTGGTTATCGGCCATGGGGTTCGTGCAAGCCAGGAAAAGAGATGCCTATGATAAACACTTTTCCGGGCACTGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAG                                                                                        <  1:2026406/148‑1                                                             CCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCATATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCG                                                                                     <  1:2346114/149‑1                                                              cccGGCGAAGTTTTAGTGGTTCGCGGACATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTGCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGA                                                                                    <  1:987611/146‑1                                                                         TGTTGTCTTTCTCGGTCATGGTTTTCGTGCAAGCCAGGCAATTTTATGCCTTTGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCG                                                                         <  1:761797/149‑1                                                                            AGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACC                                                                      <  1:2156002/149‑1                                                                             GTCGTTCTCGGTCATGGTGTACTTGCAAGCCAGGCTCTGAGAGGGGTTTGATAATCTCATTTGCGGGCACAGGCAACCCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCC                                                                     <  2:3984570/149‑1                                                                                    TCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCC                                                              <  1:7481207/149‑1                                                                                      gctccTGGTGTTCGTCCAAGCCAGGCAAAGATAGGCCTATGATAAACCCTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTG                                                            <  1:6629189/144‑1                                                                                      GGTCTTGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTG                                                            <  1:3658359/149‑1                                                                                      GGTCATGGTGTTCGTGCAAGCCTGGCAAAGATATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTG                                                            <  1:3658689/149‑1                                                                                        gCATGGTGTTCGTGCAAGCCAGGCAAAGAGAGGCCTATGATAACCACTTTGCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGC                                                          <  2:1722098/148‑1                                                                                                  CGTGCACGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCG                                                <  2:761043/149‑1                                                                                                  CGTGCAAGCCAGGCAAAGAGATGCCTATGATAACCACTGTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCG                                                <  2:255194/149‑1                                                                                                    TGCACGCCCGGCAACGCGAGGCCTATGATAAACACTTTGCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCG                                              <  1:7284779/149‑1                                                                                                        AGCCAGGCAAAGAGATGCCTTTGATAACCACTTTTCCGGGCACAGGCAACTCCAATCAAGCGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACAC                                          <  1:3281321/149‑1                                                                                                        AGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACAC                                          <  1:2858077/149‑1                                                                                                              GCAACGAGATGCCTTTGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGA                                    <  1:7164736/149‑1                                                                                                               gaatGAGATGCCCTTGTTAAACTCTTTTCCGGCCACAGGCAACTCCAATCACGAGACCTTCAATGCCAACCAAGCCCCTACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAG                                   <  2:3354310/145‑1                                                                                                                aaagtttTGCCTTTTATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGG                                  <  1:5748572/142‑1                                                                                                                      ATGCCTATTATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCG                            <  2:3525016/149‑1                                                                                                                          CTATGATACACACATTTCCGGGCACAGGCAACTCCAATCAAGCGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTA                        <  1:2208594/149‑1                                                                                                                          CTATGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTA                        <  1:6859654/149‑1                                                                                                                             TGATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCACGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCT                     <  2:7591777/149‑1                                                                                                                               ATAAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGC                   <  1:5655555/149‑1                                                                                                                                 AAACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAA                 <  1:4922460/149‑1                                                                                                                                   ACACTTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGC               <  2:2802783/149‑1                                                                                                                                       tgTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAA           <  2:66905/147‑1                                                                                                                                       TTTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAA           <  1:4613519/149‑1                                                                                                                                        TTTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCACGCCGACCAGGCCACCGACCCGTAGGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAA          <  1:2594060/149‑1                                                                                                                                         TTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAA         <  1:6634797/149‑1                                                                                                                                         TTCCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAA         <  1:6634809/149‑1                                                                                                                                           CCGGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACG       <  2:5347255/149‑1                                                                                                                                               GCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTA   <  2:1948578/149‑1                                                                                                                                               GCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTA   <  2:577060/149‑1                                                                                                                                               GCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTA   >  2:1527408/1‑149                                                                                                                                                CACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAACACGCCTAC  >  2:6595216/1‑149                                                                                                                                                                                                                                                                                                      TCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5203394‑5203537 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAACGCCTAC  >  NC_002947/5203636‑5203783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.