New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2553842 = | NA (NA) | 3 (0.090) | 3/264 | 2.7 | 6.1% | noncoding (1161/2902 nt) | PP_23SF | 23S ribosomal RNA |
? | NC_002947 | 3086810 = | 46 (1.430) | coding (265/987 nt) | PP_2693 | putative Dipeptidase | |||||
Rejected: Frequency below/above cutoff threshold. |
TTCGGCGTGCGAGTTTTTCACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2553972‑2553842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCTGGAAGCCGAAGAAGATACCCACCC > NC_002947/3086810‑3086839 TTCGGCGTGCGAGTTTTTAACTCGCAATGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCACCAGCAAGCTTCTAAACACACCATCACAGGCTTACAGAACGCTCCTCTACCCCAACATCATAAGATAtgta > 2:24791/1‑132 ATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATAGTTCTGGAAGCCGAAGAAGATACCCACCC < 1:833715/123‑1 ATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGATAGTTCTGGAAGCCGAAGAAGATACCCACCC > 2:833715/1‑123 TTCGGCGTGCGAGTTTTTCACTCGCATTGTCGTTACTCATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCTTCTCAACTCACCTTCACAGGCTTACAGAACGCTCCTCTACCGCATCATCATAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2553972‑2553842 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGTTCTGGAAGCCGAAGAAGATACCCACCC > NC_002947/3086810‑3086839 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |