Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3055136	3055211	76	4 [3]	[2] 5	[PP_2664]–[agmR]	[PP_2664],[agmR]

GCCCGCCGCGCCCAGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGC  >  NC_002947/3055000‑3055148                                                                                                                                        |              gCCCGCCGCGCCCAGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCTAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCTATGAAACTCAAGACGGCGATGa               <  1:92292/136‑1 (MQ=255)        gcgcCCAGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATct        >  1:46981/1‑136 (MQ=255)        gcgcCCAGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATct        >  2:725198/1‑136 (MQ=255)              aGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGc  <  1:725198/136‑1 (MQ=255)                                                                                                                                        |              GCCCGCCGCGCCCAGCCGCTACCGGCGCTGATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGC  >  NC_002947/3055000‑3055148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑