Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_002947 2627366 2627618 253 4 [1] [1] 2 PP_2297 integrase

GTCCTAAAGGCGTGCCAGCACCTGGGGCTCAACTGCCTTCACGACTTCATCATTGTGGCGGTCGATACAGGGTTCCGCCGCGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGTACGCCGGACAGACCAAGAACGGAGACGCCCGTGCCATCCCGGCTACCAGTCGCGTGGCGC  >  NC_002947/2627230‑2627425
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gTCCTAAAGGCGTGCCAGCACCTGGGGCTCAACTGCCTTCACGACTTCATCATTGTGGCGGTCGATACAGGGTTCCGCCGCGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGt                                                              <  2:247357/136‑1 (MQ=255)
                                                            gTCGATACAGGGTTCCGCCGCGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGTACGCCGGACAGACCAAGAACGGAGACGCCCGTGCCATCCCGGCTACCAGTCGCGTGgcgc  <  2:194708/136‑1 (MQ=255)
                                                                         tacgccgcGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGt                                                              >  1:45374/3‑63 (MQ=255)
                                                                         tacgccgcGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGt                                                              <  2:45374/61‑1 (MQ=255)
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GTCCTAAAGGCGTGCCAGCACCTGGGGCTCAACTGCCTTCACGACTTCATCATTGTGGCGGTCGATACAGGGTTCCGCCGCGCTGAACTCCTCGGGCTCAGTGCTCCTGACTTCCAGGAAGGGATGATTCACCTGTACGCCGGACAGACCAAGAACGGAGACGCCCGTGCCATCCCGGCTACCAGTCGCGTGGCGC  >  NC_002947/2627230‑2627425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: