Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3415419	3415449	31	2 [0]	[0] 2	PP_3026	recombinase

GTGGTCACTGCGAGTGACGGCCGTGAGTACAACAGGGAAAGGCTGAAAGCGCAGCCAATGGACCTGGTTTATAGCCTTCTGGTCATGATCCGGGCTCACGAAGAGAGCGATACCAAAAGCA  >  NC_002947/3415298‑3415418                                                                                                                         | gTGGTCACTGCGAGTGACGGCCGTGAGTACAACAGGGAAAGGCTGAAAGCGCAGCCAATGGACCTGGTTTATAGCCTTCTGGTCATGATCCGGGCTCACGAAGAGAGCGATACCAAaagca  <  1:252510/121‑1 (MQ=255) gTGGTCACTGCGAGTGACGGCCGTGAGTACAACAGGGAAAGGCTGAAAGCGCAGCCAATGGACCTGGTTTATAGCCTTCTGGTCATGATCCGGGCTCACGAAGAGAGCGATACCAAaagca  >  2:252510/1‑121 (MQ=255)                                                                                                                         | GTGGTCACTGCGAGTGACGGCCGTGAGTACAACAGGGAAAGGCTGAAAGCGCAGCCAATGGACCTGGTTTATAGCCTTCTGGTCATGATCCGGGCTCACGAAGAGAGCGATACCAAAAGCA  >  NC_002947/3415298‑3415418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑