Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4288539	4288564	26	2 [1]	[1] 2	PP_3758	two component system response regulator/sensor histidine kinase

AACCACATCTTGTGCATCTTCACTCATGTTAACGCCTTGAAATACTTACAGTTGGCCATCAGACCCCAGGCTTACACAGAGGTTGCCCGCGCCTGGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCT  >  NC_002947/4288404‑4288554                                                                                                                                       |                 aaCCACATCTTGTGCATCTTCACTCATGTTAACGCCTTGAAATACTTACAGTTGGCCATCAGACCCCAGGCTTACACAGAGGTTGCCCGCGCCTGGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAggt                 <  2:19158/136‑2 (MQ=255)                aTCTTCACTCATGTTAACGCCTTGAAATACTTACAGTTGGCCATCAGACCCCAGGCTTACACAGAGGTTGCCCGCGCCTGGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCt  <  1:110965/136‑1 (MQ=255)                                                                                                                                       |                 AACCACATCTTGTGCATCTTCACTCATGTTAACGCCTTGAAATACTTACAGTTGGCCATCAGACCCCAGGCTTACACAGAGGTTGCCCGCGCCTGGTCGTTTTGTTCTTTGAATGTTGCCAGCGGCAATTGCAGGGTGAATGTGGCACCCT  >  NC_002947/4288404‑4288554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑