Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4983362	4983604	243	2 [1]	[1] 2	flgE	flagellar hook protein FlgE

GGTGGAGGCCGGATTGGCCGGGTTGCGGCCATCGATAGTGGTGTGCATGGACCAGGTATTGGTCGCGTCGTCCTTGATGAAGTACTGGTTCATCTGGTGTTCATTACCCTGGCTGTCGAACACCGGGGTATTGAACGTGAAGTTGTAGGAACTGGCATTGGTGGGATCGAAGGGCGTCACCGACGGGGAGGTCGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCG  >  NC_002947/4983226‑4983461                                                                                                                                        |                                                                                                     ggtggAGGCCGGATTGGCCGGGTTGCGGCCATCGATAGTGGTGTGCATGGACCAGGTATTGGTCGCGTCGTCCTTGATGAAGTACTGGTTCATCTGGTGTTCATTACCCTGGCTGTCGAACACCGGGGTATTGAAc                                                                                                      <  1:24819/136‑1 (MQ=255)                                                                                                     tCATTACCCTGGCTGTCGAACACCGGGGTATTGAACGTGAAGTTGTAGGAACTGGCATTGGTGGGATCGAAGGGCGTCACCGACGGGGAGGTCGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCg  >  1:12190/1‑136 (MQ=255)                                                                                                                                        |                                                                                                     GGTGGAGGCCGGATTGGCCGGGTTGCGGCCATCGATAGTGGTGTGCATGGACCAGGTATTGGTCGCGTCGTCCTTGATGAAGTACTGGTTCATCTGGTGTTCATTACCCTGGCTGTCGAACACCGGGGTATTGAACGTGAAGTTGTAGGAACTGGCATTGGTGGGATCGAAGGGCGTCACCGACGGGGAGGTCGCAGCCGAGTTCAGGTTGATCTTCTCGGTGATGAGGCTGGTCG  >  NC_002947/4983226‑4983461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑