Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2134080	2134115	36	2 [1]	[1] 2	fimD	type I pili subunit FimD

GGTAGCGGCCAGGCGCGAGCCCCTGATCGCTGGTCAACATGCTCAGCGACCAGGCACTCGCTGCTTGCGGTTGGCCAGGCACTTGGCGCAGGAAGCCGCTCTGGAACCCGGAGTCTGCCTGGGAGTAGGGCGCTGAGAGCA  >  NC_002947/2133944‑2134084                                                                                                                                        |      ggTAGCGGCCAGGCGCGAGCCCCTGATCGCTGGTCAACATGCTCAGCGACCAGGCACTCGCTGCTTGCGGTTGGCCAGGCACTTGGCGCAGGAAGCCGCTCTGGAACCCGGAGTCTGCCTGGGAGTAGGGCGCTga       <  1:81120/136‑1 (MQ=255)      cGGCCAGGCGCGAGCCCCAGAACGCTGGTCAACATGCTCAGCGACCAGGCACTCGCTGCTTGCGGTTGGCCAGGCACTTGGCGCAGGAAGCCGCTCTGGAACCCGGAGTCTGCCTGGGAGTAGGGCGCTGAGAGCa  >  2:98225/1‑136 (MQ=255)                                                                                                                                        |      GGTAGCGGCCAGGCGCGAGCCCCTGATCGCTGGTCAACATGCTCAGCGACCAGGCACTCGCTGCTTGCGGTTGGCCAGGCACTTGGCGCAGGAAGCCGCTCTGGAACCCGGAGTCTGCCTGGGAGTAGGGCGCTGAGAGCA  >  NC_002947/2133944‑2134084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑