Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3105740	3105748	9	2 [0]	[0] 2	PP_2714	sensor histidine kinase

TACACCCAGTGCGCCACCCATCGACCCACCACCCACTGCTCCAGGGTTCTACGACTTTTCCAGTGGCGGTGAACAATGGCGCGGTTTCGTTTTGCCGGTGCCGGAAAAACACTGGCTTATCTGGGTGGGGGAGCGT  >  NC_002947/3105749‑3105884 |                                                                                                                                        tACACCCAGTGCGCCACCCATCGACCCACCACCCACTGCTCCAGGGTTCTACGACTTTTCCAGTGGCGGTGAACAATGGCGCGGTTTCGTTTTGCCGGTGCCGGAAAAACACTGGCTTATCTGGGTGGGGGAGCGt  >  1:123451/1‑136 (MQ=255) tACACCCAGTGCGCCACCCATCGACCCACCACCCACTGCTCCAGGGTTCTACGACTTTTCCAGTGGCGGTGAACAATGGCGCGGTTTCGTTTTGCCGGTGCCGGAAAAACACTGGCTTATCTGGGTGGGGGAGCGt  >  1:72098/1‑136 (MQ=255) |                                                                                                                                        TACACCCAGTGCGCCACCCATCGACCCACCACCCACTGCTCCAGGGTTCTACGACTTTTCCAGTGGCGGTGAACAATGGCGCGGTTTCGTTTTGCCGGTGCCGGAAAAACACTGGCTTATCTGGGTGGGGGAGCGT  >  NC_002947/3105749‑3105884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑