Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3355802	3356359	558	2 [0]	[1] 2	PP_2949	permease

TGCTGGTAGCGTTGCCGTTCATGCTGCTGCTGACGGTGGTCAATCTTCCAGCCCCTGATGACTTTGCCAGGGTAAGTGCCCCTGCGTGGTTCAGCTTTGGCTACGTTTCACTGTTCAGCATGCTGATCGGGTTTGTGTTCTGGTACCGAGGGCTCGTCCAGGGGGGGATTGCGGCAGTGGGCCAATTGCAACTCTTTCAGCCGTTCATGGGGCTTGGGCTGGCAG  >  NC_002947/3356271‑3356495                                                                                          |                                                                                                                                        tGCTGGTAGCGTTGCCGTTAATGCTGCTTCTGACGGTGGTCAATCTTCCAGCCCCTGATGACTTTGCGAGGGTAAGTGCGCCTGCGTGGTTCAGCTTTGGCTACGTTTCACTGTTCAGCATGCTGATCGGGCTtgt                                                                                           <  1:197247/136‑1 (MQ=255)                                                                                          ttCAGCTTTGGCTACGTTTCACTGTTCAGCATGCTGATCGGGTTTGTGTTCTGGTACCGAGGGCTCGTCCAGGGGGGGATTGCGGCAGTGGGCCAATTGCAACTCTTTCAGCCGTTCATGGGGCTTGGGCTGGCAg  >  2:216051/1‑136 (MQ=255)                                                                                          |                                                                                                                                        TGCTGGTAGCGTTGCCGTTCATGCTGCTGCTGACGGTGGTCAATCTTCCAGCCCCTGATGACTTTGCCAGGGTAAGTGCCCCTGCGTGGTTCAGCTTTGGCTACGTTTCACTGTTCAGCATGCTGATCGGGTTTGTGTTCTGGTACCGAGGGCTCGTCCAGGGGGGGATTGCGGCAGTGGGCCAATTGCAACTCTTTCAGCCGTTCATGGGGCTTGGGCTGGCAG  >  NC_002947/3356271‑3356495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑