Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4970354	4970379	26	2 [1]	[1] 2	fliC	flagellin

AGCGACTGCATGGCACCATCCAGAACCTGGATAGCCTGCTGAGCACTTTGCGCGTCCGTGATGTTCAGGTTGGAAACGGTAGATTCCATCTCGACGGCAGAGGTCTTGCCTGCAACAGCAGTCAGACCCAGCGCGGCC  >  NC_002947/4970378‑4970515   |                                                                                                                                        cgCGACTGCATGGCACCATCCAGAACCTGGATAGCCTGCTGAGCACTTTGCGCGTCCGTGATGTTCAGGTTGGAAACGGTAGATTCCATCTCGACGGCAGAGGTCTTGCCTGCAACAGCAGTCAGACCCAGCGCgg    <  2:261320/135‑1 (MQ=255)   cGACTGCATGGCACCATCCAGAACCTGGATAGCCTGCTGAGCACTTTGCGCGTCCGTGATGTTCAGGTTGGAAACGGTAGATTCCATCTCGACGGCAGAGGTCTTGCCTGCAACAGCAGTCAGACCCAGCGCGGcc  >  2:244542/1‑136 (MQ=255)   |                                                                                                                                        AGCGACTGCATGGCACCATCCAGAACCTGGATAGCCTGCTGAGCACTTTGCGCGTCCGTGATGTTCAGGTTGGAAACGGTAGATTCCATCTCGACGGCAGAGGTCTTGCCTGCAACAGCAGTCAGACCCAGCGCGGCC  >  NC_002947/4970378‑4970515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑