Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5004438	5004617	180	3 [1]	[1] 2	PP_4409	site‑specific recombinase

GCCTTGGTAATTACTTCCAGAAATACAAAGACTACTGCGAGAACGGGCTGGTAATTGAAAAGCCCGAAACAACTCTTCTTATCGAAAGCCTGATGAAAATCACCCCTACTACCATCAGGGTTCGAGAGAGAGAAAAAGTAGCAGCCAGGCAACAAGCAGCACCGATGACAGCTG  >  NC_002947/5004580‑5004753                                       |                                                                                                                                        gCCTTGGTAATTACTTCCAGAAATACAAAGACTACTGCGAGAACGGGCTGGTAATTGAAAAGCCCGAAACAACTCTTCTTATCGAAAGCCTGATGAAAATCACCCCTACTACCATCAGGGTTCGAGAGAGAGaaaa                                        >  2:147605/1‑136 (MQ=255)                                       gagaACGGGCTGGTAATTGAAAAGCCCGAAACAACTCTTCTTATCGAAAGCCTGATGAAAATCACCCCTACTACCATCAGGGTTCGAGAGAGAGAAAAAGTAGCAGCCAGGCAACAAGCAGCACCGATGACAGCTg  >  2:211589/1‑136 (MQ=255)                                       |                                                                                                                                        GCCTTGGTAATTACTTCCAGAAATACAAAGACTACTGCGAGAACGGGCTGGTAATTGAAAAGCCCGAAACAACTCTTCTTATCGAAAGCCTGATGAAAATCACCCCTACTACCATCAGGGTTCGAGAGAGAGAAAAAGTAGCAGCCAGGCAACAAGCAGCACCGATGACAGCTG  >  NC_002947/5004580‑5004753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑