Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5042714	5042837	124	2 [1]	[1] 2	PP_5680	Cro/CI family transcriptional regulator

CGGCTCTGCAGAATTGGCTCGGCAGCTCGAACTGGGAGGACAGCAAGCCAGAAACGCTGCCAGGGATAGCCGCACCGCTGAAATTCGAGCCTGTAAAGCCAGAGGTCTCACTCAACGCCAAACTGCTGCTGAGCTCTCCCTATCAAAATCTA  >  NC_002947/5042821‑5042972                  |                                                                                                                                       cggcTCTGCAGAATTGGCTCGGCAGCTCGAACTGGGAGGACAGCAAGCCAGAAACGCTGCCAGGGATAGCCGCACCGCTGAAATTCGAGCCTGTAAAGCCAGAGGTCTCACTCAACGCCAAACTGCTGCTGAGctc                  <  2:236710/136‑1 (MQ=255)                 tcTCGGCAGCTCGAACTGGGAGGACAGCAAGACAGAAACGCTGCCAGGGATAGCCGCACCGCTGAAATTCGAGCCTGTAAAGCCAGAGGTCTCACTCAACGCCAAACTGCTGCTGAGCTCTCCCTATCAAAATCTa  >  2:247804/2‑136 (MQ=255)                  |                                                                                                                                       CGGCTCTGCAGAATTGGCTCGGCAGCTCGAACTGGGAGGACAGCAAGCCAGAAACGCTGCCAGGGATAGCCGCACCGCTGAAATTCGAGCCTGTAAAGCCAGAGGTCTCACTCAACGCCAAACTGCTGCTGAGCTCTCCCTATCAAAATCTA  >  NC_002947/5042821‑5042972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑