Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5253066	5253167	102	3 [1]	[1] 3	[cidR]	[cidR]

GCGCAGCTTCATCGAAGTGGTGCACCGCGGCGGTTTTACCCAGGCGGCACAGACCCTGCACATCAGCCAGTCGGCCGTGAGCAAGCAGGTGGCCCAGCTTGAGCAAGATGTGGGCCAGCCGCTGCTGGAGCGCCAGGCGTCACACCTGCACTTGACCGC  >  NC_002947/5253145‑5253303                        |                                                                                                                                        gcgcAGCTTCATCGAAGTGGTGCACCGCGGCGGTTTTACCCAGGCGGCACAGACCCTGCACATCAGCCAGTCGGCCGTGAGCAAGCAGGTGGCCCAGCTTGAGCAAGATGTGGGCCAGCCGCTGCTGGAGCGCCAg                         >  2:219667/1‑136 (MQ=255)                        aCCGCGGCGGTTTTACCCAGGCGGCACAGCCCCTGCACATCAGCCAGTCGGCCGTGAGCAAGCAGGTGGCCCAGCTTGAGCAAGATGTGGGCCAGCCGCTGCTGGAGCGCCAGGCGTCACACCTGCACTTGACCGc  >  1:236647/1‑136 (MQ=255)                        aCCGCGGCGGTTTTACCCAGGCGGCACAGACCCTGCACATCAGCCAGTCGGCCGTGAGCAAGCAGGTGGCCCAGCTTGAGCAAGATGTGGGCCAGCCGCTGCTGGAGCGCCAGGCGTCACACCTGCACTTGACCGc  >  2:229433/1‑136 (MQ=255)                        |                                                                                                                                        GCGCAGCTTCATCGAAGTGGTGCACCGCGGCGGTTTTACCCAGGCGGCACAGACCCTGCACATCAGCCAGTCGGCCGTGAGCAAGCAGGTGGCCCAGCTTGAGCAAGATGTGGGCCAGCCGCTGCTGGAGCGCCAGGCGTCACACCTGCACTTGACCGC  >  NC_002947/5253145‑5253303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑