Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5559784	5559899	116	3 [1]	[1] 3	PP_4888/purA	methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase

GGCCCTTCTCAGGGCC‑G‑CGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTG  >  NC_002947/5559889‑5560029            |                                                                                                                                    ggCCCCTCCCGGGGCCGG‑CCGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATg        <  1:20767/136‑1 (MQ=255)      ttctgggggCG‑G‑CGGCGTCAGATCAGCGTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTg  <  2:201651/130‑1 (MQ=255)       ctctcgggCC‑GCCGGCGTCAGAGCAGCCTGGCAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGGCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTg  <  1:190090/131‑1 (MQ=255)            |                                                                                                                                    GGCCCTTCTCAGGGCC‑G‑CGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTG  >  NC_002947/5559889‑5560029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑