Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5651412	5651620	209	3 [1]	[1] 2	PP_4959	diguanylate cyclase

TGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGG  >  NC_002947/5651598‑5651756                        |                                                                                                                                        tGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCCGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCag                         >  2:247110/1‑135 (MQ=255)                        gCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTgg  >  1:23893/1‑136 (MQ=255)                        |                                                                                                                                        TGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGACCTGTGGCTGG  >  NC_002947/5651598‑5651756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑