Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5748881	5749033	153	2 [1]	[1] 2	PP_5043	PhoPQ‑activated pathogenicity‑like protein

CACCCTGAGGCTGGTCTGGCCAGGCAGGCGCTGCAGGTAGTCCGTGGCGTGATCAGGGGCGAAGAAATCATCCCCGCTGGCGGACACCAGGTATTTCGGTATCTTCAGGCGAGCACCCGGCTCATCCAGGTACTGCATCGGGTCCATCAGTGCCATCAACCGAGCGAAGGCCGGGCTGCCCAACTGCTGCAATACCTCCGCAGCCTGATAG  >  NC_002947/5748959‑5749169                                                                            |                                                                                                                                        caCCCTGAGGCTGGTCTGGCCAGGCAGGCGCTGCAGGTAGTCCGTGGCGTGATCAGGGGCGAAGAAATCATCCCCGCTGGCGGACACCAGGTATTTCGGTATCTTCAGGCGAGCACCCGGCTCATCCAGGTACTGc                                                                             <  1:171984/136‑1 (MQ=255)                                                                            gCTGGCGCACACCAGGTATTTCGGAAACATCAGGCGAGCACCCGGCTCATCCAGGAACTGCATCGGGTCCATCAGTGCCATCAACCGAGCGAAGGCCGGGCTGCCCATCTCCTGCAATACCACCGCAGCCAGAAAg  >  2:199491/1‑136 (MQ=255)                                                                            |                                                                                                                                        CACCCTGAGGCTGGTCTGGCCAGGCAGGCGCTGCAGGTAGTCCGTGGCGTGATCAGGGGCGAAGAAATCATCCCCGCTGGCGGACACCAGGTATTTCGGTATCTTCAGGCGAGCACCCGGCTCATCCAGGTACTGCATCGGGTCCATCAGTGCCATCAACCGAGCGAAGGCCGGGCTGCCCAACTGCTGCAATACCTCCGCAGCCTGATAG  >  NC_002947/5748959‑5749169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑