Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2133544	2133572	29	2 [1]	[1] 2	fimD	type I pili subunit FimD

CTGGTGTAACGGCCAGAGGAGCGGTTGCGGCCGTTCAGGGTGGAGGCCTGATAGTTGATGAAAGCGGCATTGATACCACTGTCCCAGCGGGAAGGGTCGACCTGGTTAGCGGTGTTCCGGCGCATGGAGATCTGCGGAATC  >  NC_002947/2133568‑2133708      |                                                                                                                                        cTGGTGTAACGGCCAGAGGAGCGGTTGCGGCCGTTCAGGGTGGAGGCCTGATAGTTGATGAAAGCGGCATTGATACCACTGTCCCAGCGGGAAGGGTCGACCTGGTTAGCGGTGTTCCGGCGCATGGAGATCTGCg       >  2:134256/1‑136 (MQ=255)      gtAACGGCCAGAGGAGCGGTTGCGGCCGTTCAGGGTGGAGGCCTGATAGTTGATGAAAGCGGCATTGATACCACTGTCCCAGCGGGAAGGGTCGACCTGGTTAGCGGTGTTCCGGCGCATGGAGATCTGCGGAATc  >  1:70994/1‑136 (MQ=255)      |                                                                                                                                        CTGGTGTAACGGCCAGAGGAGCGGTTGCGGCCGTTCAGGGTGGAGGCCTGATAGTTGATGAAAGCGGCATTGATACCACTGTCCCAGCGGGAAGGGTCGACCTGGTTAGCGGTGTTCCGGCGCATGGAGATCTGCGGAATC  >  NC_002947/2133568‑2133708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑