Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2225883	2226151	269	2 [1]	[0] 2	PP_1962	site‑specific recombinase

ATTTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATT  >  NC_002947/2226152‑2226274 |                                                                                                                           aTTTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTAAGATTTCGCTTTGGATGATACGAAGGAACGAATACGAtt  >  1:239418/1‑123 (MQ=255) aTTTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTAAGATTTCGCTTTGGATGATACGAAGGAACGAATACGAtt  <  2:239418/123‑1 (MQ=255) |                                                                                                                           ATTTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATT  >  NC_002947/2226152‑2226274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑