Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	2478504	2478729	226	3 [1]	[0] 2	PP_2170	chorismate mutase family protein

GGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTG  >  NC_002947/2478730‑2478834 |                                                                                                         ggACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTg  <  1:137462/105‑1 (MQ=255) ggACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTg  >  2:137462/1‑105 (MQ=255) |                                                                                                         GGACCTGGCACAGAAGCTACACTGCACGCCCCGATCACCCACGACAGCCTGCTCCAATCAATCGCAGGCTCATGAAAAGGAAGTCATGCAAATGGATGTACCTTG  >  NC_002947/2478730‑2478834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑