Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,680,017 | T→G | 100% | T276P (ACC→CCC) | PP_1475 ← | CAIB/BAIF family protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,680,017 | 0 | T | G | 100.0% | 23.7 / NA | 8 | T276P (ACC→CCC) | PP_1475 | CAIB/BAIF family protein |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (5/3); total (5/3) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGTCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCG > NC_002947/1679922‑1680114 | cATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATg < 1:135878/136‑1 (MQ=255) tCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGaa > 2:178437/1‑136 (MQ=255) tGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCAcc > 2:232244/1‑136 (MQ=255) gTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGt > 1:178621/1‑77 (MQ=255) gTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGt < 2:178621/77‑1 (MQ=255) aaCAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGGCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGc < 2:13049/135‑1 (MQ=255) gTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcg > 1:162773/1‑136 (MQ=255) gTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcg > 1:32159/1‑136 (MQ=255) | CATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGTCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCG > NC_002947/1679922‑1680114 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |