New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1 = | 0 (0.000) | 33 (0.740) | 21/264 | 0.5 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– |
TTGTAGCGTGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/135‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGGTCAGTGGAT < NC_002947/6183851‑6183719 TTGTAGCGTGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTG < 1:100709/136‑1 GCGTGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATG < 1:470758/136‑1 TGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAA > 2:1163373/1‑136 AATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCA > 1:899743/1‑136 AATAGGGGTTAATCCACCCCTAAACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCA > 2:737043/1‑136 TAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATC > 1:1133832/1‑136 TAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGC < 1:1153126/136‑1 TATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGG > 2:936378/1‑136 TGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCT > 1:16623/1‑136 TGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCT > 1:978295/1‑136 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGg > 2:660579/1‑135 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGg > 1:80291/1‑135 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC > 2:665730/1‑136 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC > 2:452113/1‑136 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC > 2:57993/1‑136 GCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGC > 1:869431/1‑136 GCATTTTGTCGGCACAAATTATGTCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC > 1:203537/1‑136 GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC > 1:963332/1‑136 GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC > 1:740266/1‑136 GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC < 1:294892/136‑1 GCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTC > 2:437733/1‑136 ACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACT < 1:665730/136‑1 AAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGC > 1:968406/1‑136 TATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCT < 2:215485/136‑1 TGACTTGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTG < 2:792449/136‑1 TGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCA > 2:120557/1‑136 TGTTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCA > 1:685115/1‑136 TTGGTCGACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGT < 1:437733/136‑1 GACTTCCGAGGAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAG < 2:978295/136‑1 GGATCAGTTGTTATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGTCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGGTCA < 2:199710/136‑1 GAGCAGTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGGTCAG < 1:747781/136‑1 tTTGTGATGGAAATACGCACGCCAAAGCGCCTGCCTTTCCATCGCTTGGCGGTTTTTCCTGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCTGTGGAAAGGGTCGGTCAGTGGAT < 2:811243/135‑1 GTTGTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGGTCAGTGGAT < 2:811239/136‑1 TTGTAGCGTGAAGTCGGAAATCACTACCGAAGAGTTGAATAGGGGTTAATCCACCCCTATACTCTGCGCGCATTTTGTCGGCACAAATTATGCCAAGTCATAGCTGACTTGTTGGTCGACTTCCGAGGAGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/135‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATGGAAATACGCACGCCAAACCGCCTGCCTTTCCATCGCTGGGCGGTTTTTCCGGTACTGCTGGCTCAATTTGTCGTACTGCTGCTGGCAACCTTGGTGTTGTGGCAGTGGAAAGGGTCGGTCAGTGGAT < NC_002947/6183851‑6183719 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |