Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,534,609	0	C	A	36.2%	117.2 / 19.1	71	R860S (CGC→AGC)	secA	protein translocase subunit SecA
Reads supporting (aligned to +/- strand):  ref base C (25/19);  new base A (25/0);  total (52/19)
Fisher's exact test for biased strand distribution p-value = 4.07e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CGGTATTCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAG  >  NC_002947/1534476‑1534744                                                                                                                                      |                                                                                                                                        cGGTATTCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTGGCACGTACAGGTTcgc                                                                                                                                       >  1:220537/1‑136 (MQ=255)    tATTCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTcgccgc                                                                                                                                    <  2:612447/136‑1 (MQ=255)      ttCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTTCAGGTTCGCCGCGa                                                                                                                                  >  2:745492/1‑136 (MQ=255)         aCCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGGACGGTCACGTTAGCCGCGaaaa                                                                                                                               >  2:680788/1‑134 (MQ=255)         aCCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCCCGGAAAAGTTAGCcccgcaac                                                                                                                               >  2:188527/1‑132 (MQ=255)         aCCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCCCGGACAAGTTCGCCCCGAAgc                                                                                                                               >  1:560310/1‑135 (MQ=255)              cGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGGGGGACGTACAGGTTGGGCGCGGAGAccccg                                                                                                                          >  1:62073/1‑134 (MQ=255)                 ggTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGCCACCATCCGTGGGGGGTGGGCCGGTCAGGTTGGCCGCGCAGACCCGGCCg                                                                                                                       >  1:971796/1‑136 (MQ=255)                 ggTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTTCGGTCGCCCGGAAAGGTTAGCCGCGAAGACCCGGCCg                                                                                                                       >  2:752543/1‑136 (MQ=255)                 ggTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGGACGGACAAGTTAGCCCCGAAGAACCCGccc                                                                                                                       >  1:71289/1‑135 (MQ=255)                 ggTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCCCGGACAGGTTCGCCGCGCAGACCCGGCCg                                                                                                                       >  2:555177/1‑136 (MQ=255)                 ggTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCg                                                                                                                       >  1:574074/1‑136 (MQ=255)                   ttATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACCTACAGGTTCGCCGCGAAGACCCCGCCgaa                                                                                                                     >  2:708957/1‑136 (MQ=255)                       gcgcAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCgaagaag                                                                                                                 <  2:789725/136‑1 (MQ=255)                        cgcAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGCAGACCCGGCCgaagaaga                                                                                                                >  2:1041363/1‑136 (MQ=255)                        cgcAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCggagaaga                                                                                                                >  1:676744/1‑136 (MQ=255)                        cgcAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCgaagaaga                                                                                                                >  2:805898/1‑136 (MQ=255)                                aaCCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTGGCCCCTAAACGTTAGCCGCGAAGACCCCGCCGAAGAAGAAGCTCGcc                                                                                                        >  2:1033708/1‑136 (MQ=255)                                aaCCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCACGGACAGGTTCGCCGCGAAGACCCGGCCGCAGAAGAAGCTCGcc                                                                                                        >  1:741644/1‑136 (MQ=255)                                aaCCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGGGTCGGCCGGACAGGGTAGCCGCGCAGACCCCGCCGCAGAAGAACCTCGcc                                                                                                        >  1:1147673/1‑136 (MQ=255)                                aaCCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCCCGTTCAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGcc                                                                                                        >  2:995833/1‑136 (MQ=255)                                aaCCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGcc                                                                                                        >  1:597220/1‑136 (MQ=255)                                      aaGCAGGAGTAGATGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGcgcc                                                                                                  <  2:1043769/136‑1 (MQ=255)                                          aGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCCCGGACAGGTTAGCCCCGCAGACCCCGCCCAAAAAGAAACACGCCAGCGCcgcgc                                                                                              >  2:807166/1‑135 (MQ=255)                                          aGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGGACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAACCTCGCCAGcgccgccc                                                                                              >  2:93523/1‑134 (MQ=255)                                          aGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACCGTCAAGTTATCCCCGAAGACCCGGCCGCAGAAAAACCACGCCAGCCCcgcgc                                                                                              >  2:994065/1‑135 (MQ=255)                                          aGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGCGTGCTGTCGCACGTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCcgcgg                                                                                              >  1:89857/1‑135 (MQ=255)                                                    gcgcGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCACGGACAGGTTAGGCGCGAAGACCCCGCCGCAGAAGAAGCACGCCAGCGCCGCGCGGCCGAagag                                                                                    >  1:805967/1‑136 (MQ=255)                                                    gcgcGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCCCGTTCAGGTTCGCCGCGAAGACCCGGCCGCAGAAGAAGCTCGCCTGCGCCCCGCGGCCGaacac                                                                                    >  1:736095/1‑133 (MQ=255)                                                      gcgAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCt                                                                                  <  2:216385/136‑1 (MQ=255)                                                       cgAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCCCGGACAGGTTAGCCGCGAAGACCCCGCCGAACCACAACCTCGCCGGCCCCCCGAGGCCCCAGAGcgg                                                                                 >  1:26504/1‑134 (MQ=255)                                                         aGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTGGCCCGTACAGGTTAGCCGCGCAGACCCCGCCGAAGAAGAAGCTAGCCTGCGCCGCGAGGCCGCAGAGCTggg                                                                               >  1:36922/1‑135 (MQ=255)                                                         aGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGGACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCAGCGCCGCGCGGCCGCAGAGCTGGc                                                                               >  1:752755/1‑136 (MQ=255)                                                         aGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGGTGTCGCACGTACAGGTTCGCCGCGCAGACCCGGCCGCAGAAGAACCTCGCCAGCGCCCCGGGGCCGCAGAGCAGGc                                                                               >  1:375693/1‑136 (MQ=255)                                                          gTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCCCGTACAGGTTAGCCGCGAAGACCCGGCCGCAGAAGAAGCTAGCCTGCGCCGCGAGGCCGCAGAGCTGGcc                                                                              >  1:414726/1‑135 (MQ=255)                                                          gTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTAGCACGTACACGTTAGCCGCCAAGACCCCGCCCAAGAAGAAGCACCCCAGCCCCCCGAAGCCGAAAAGCTGGcc                                                                              >  1:135211/1‑135 (MQ=255)                                                            cGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTTCTGTCGCACGTACAGGTTCGCCGCGAAGGCCCGGACGAAGAAGAAGCTCGCCTGCTCCGAGAGGACGAAGAGCTGGagag                                                                            >  2:455190/1‑136 (MQ=255)                                                            cGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAACCGCGACACCATCCGTGTTCTGTAGCACGTTAAGGTTACCCCCCAACACCCGGCCGAACAAGAAGCTCGCCAGCCCCGCGCGGCCCAAGAGCAGGCGAg                                                                            >  2:719955/1‑136 (MQ=255)                                                                cAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGc                                                                        <  1:814931/136‑1 (MQ=255)                                                                cAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGc                                                                        <  1:1046518/136‑1 (MQ=255)                                                                 aGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTTCTGTAGCACCTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCACGCCAGCGCCGCCCGGCCGCAGAGCTGGCGAGTCGcc                                                                       >  1:711273/1‑135 (MQ=255)                                                                         ccAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTTGTGTAGCCCGTACACGTTAGCCGCCAAGCCCCCGCCGAAAAAGAAACAAGCCAACGCCCCGCCGCCGAACATCAGGCCAGTAGCCTGGAGtta                                                               >  2:1119337/1‑135 (MQ=255)                                                                         ccAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACCTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCAGCGCCCCGAGGCCCAAGAGCTGGCGAGTCGCAAGCAGtta                                                               >  1:60618/1‑135 (MQ=255)                                                                          cAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCCTGTTCAGTCGCAAGAAAAAGTTAACCGCGAAGAACCCCCCCAATAAAAATCTCCCCAGCGCCCCCAGGCCGAACAGCAGGCGACTAGCGAGCAGttaa                                                              >  2:213666/1‑134 (MQ=255)                                                                           aGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCa                                                             <  1:807166/136‑1 (MQ=255)                                                                           aGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCa                                                             <  2:574074/136‑1 (MQ=255)                                                                            ggAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAg                                                            <  1:841704/136‑1 (MQ=255)                                                                                cTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcg                                                        <  1:803190/136‑1 (MQ=255)                                                                                 tGTTGCAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCAGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcgc                                                       <  2:395637/136‑1 (MQ=255)                                                                                   ttGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTAGCCGCGAAGACCCGGCCCAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcgccc                                                     >  1:599046/1‑135 (MQ=255)                                                                                    tGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTGGCACGTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcgccgc                                                    >  2:814396/1‑136 (MQ=255)                                                                                    tGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCAcgccgc                                                    >  1:235825/1‑136 (MQ=255)                                                                                      gAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTg                                                  <  2:235825/136‑1 (MQ=255)                                                                                                aGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCt                                        <  1:787669/136‑1 (MQ=255)                                                                                                  cgcgACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTgg                                      <  1:146341/136‑1 (MQ=255)                                                                                                         ccATCCGTGTGCTGTCGCACGTACAGGTTCACCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTc                                                                          >  2:764862/1‑93 (MQ=255)                                                                                                         ccATCCGTGTGCTGTCGCACGTACAGGTTCACCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTc                                                                          <  1:764862/93‑1 (MQ=255)                                                                                                           aTCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGATCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGc                             <  2:64290/136‑1 (MQ=255)                                                                                                             ccGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGTGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCaa                           <  2:1024540/136‑1 (MQ=255)                                                                                                             ccGTGTGCGGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCaa                           <  2:197667/136‑1 (MQ=255)                                                                                                               gtgtTCTGTCGCACGTAAAGGTTCGCCCCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGCGGCCGAAGAGCTGGCGAGTCGCATGCACTTCCAGCACGCCGCTGCCCTGGGCCTGGGAAGCGAGCAACt                         >  2:909657/1‑136 (MQ=255)                                                                                                               gtgtGGAGTCGCACGGACAGGTTAGCCGCCAAGACCCGGCCGAAGAAGAAGCTCGCCTGGGCCGCGCGGCCGCAGAGCTGGCCCGTCGCAAGCAGTTCCCGCACGCCGCAGCCCCGGGCCCGGGAAGCGCGCAAcc                         >  2:399631/1‑135 (MQ=255)                                                                                                               gtgtGCTGTGGCACGTACAGGTTAGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCAGCGCCCCGACGCCGAAGAGCTCGCGAGTCGCATGCAGTTACAGCACGCCCCTGCACCGGGCCGGGGAAGCGAGCAAca                         >  2:1001821/1‑135 (MQ=255)                                                                                                                     tGTCGCTCGTACAGGTACGCCGCGAAGACCCCGCCGAAGAAGAAGCTCGCCAGCGCCCCCAGGCCGAAGAGCTGGCGAGTCGCATGCACTTACAGCAAGCCGCTGCACCGGGCCTGGGAAGCGAGCAACAGAGCga                   >  2:872684/1‑136 (MQ=255)                                                                                                                       tCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCgagg                 >  2:1160286/1‑136 (MQ=255)                                                                                                                          cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGaggagg              >  1:327361/1‑136 (MQ=255)                                                                                                                          cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGaggagg              >  1:263619/1‑136 (MQ=255)                                                                                                                          cACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGaggagg              >  1:10529/1‑136 (MQ=255)                                                                                                                             gTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTg           >  1:326110/1‑136 (MQ=255)                                                                                                                               aCAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGATGAGGGTGcc         <  1:919562/136‑1 (MQ=255)                                                                                                                               aCAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGcc         >  2:456851/1‑136 (MQ=255)                                                                                                                                 aGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGCGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGa       >  2:126901/1‑136 (MQ=255)                                                                                                                                  ggTTCGCCCCGAAGACCCGGCCGAAGAACAACCTCGCCTGCGCCGCGAGGCCGCAGAGCCGGCGAGTCGCATGCAGTTCCCGCACGCCGCTGCACCGGGCCCGGGCACCGAGCAACTGAGCGAGGAGGGTGCCGaa      <  2:1165146/136‑1 (MQ=255)                                                                                                                                      cgccgcGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAggg             >  2:403689/1‑125 (MQ=255)                                                                                                                                      cgccgcGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAggg             <  1:403689/125‑1 (MQ=255)                                                                                                                                      cgccgcGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGATGGTGCCGAAGTAg  >  1:40115/1‑136 (MQ=255)                                                                                                                                      cgccgcGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAg  >  2:453341/1‑136 (MQ=255)                                                                                                                                      |                                                                                                                                        CGGTATTCACCTGCGTGGTTATGCGCAGAAGAACCCGAAGCAGGAGTACAAGCGCGAGTCGTTCAGCCTGTTCCAGGAGCTGTTGGAGTCGATCAAGCGCGACACCATCCGTGTGCTGTCGCACGTACAGGTTCGCCGCGAAGACCCGGCCGAAGAAGAAGCTCGCCTGCGCCGCGAGGCCGAAGAGCTGGCGAGTCGCATGCAGTTCCAGCACGCCGCTGCACCGGGCCTGGGAAGCGAGCAACTGAGCGAGGAGGGTGCCGAAGTAG  >  NC_002947/1534476‑1534744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑