Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	4940588	4940606	19	4 [0]	[0] 2	ddlA	D‑alanine‑‑D‑alanine ligase A

TCTCCACCGTGCCGCTCTCTTGAGTTGTGTATGAGAGCGAGCGATGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACG  >  NC_002947/4940452‑4940587                                                                                                                                        | tctcCACCGTGCCGCTCTCTTGAGTTGTGTATGAGAGCGAGCGATGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACg  <  2:284421/136‑1 (MQ=255) tctcCACCGTGCCGCTCTCTTGAGTTGTGTATGAGAGCGAGCGATGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACg  <  2:402857/136‑1 (MQ=255)                                         gcgaTGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACg  >  1:414699/1‑96 (MQ=255)                                         gcgaTGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACg  <  2:414699/96‑1 (MQ=255)                                                                                                                                        | TCTCCACCGTGCCGCTCTCTTGAGTTGTGTATGAGAGCGAGCGATGGCCTGGACGAATTGAAATCAACGGAGCCGACCGATCAACCGCACCAGGGAACTGGCACGGCTCTCCTTGATACCTCCAGTTGCCCTCACG  >  NC_002947/4940452‑4940587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑