Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	5005388	5005591	204	2 [1]	[0] 2	PP_4409	site‑specific recombinase

ATCAATTTAAGAATGCTGCCAAACGCGCTCTGCCGAATCAGCAACATCTCGCGTCGAAGCTTGGACTACATAGCCTTCGCCATAGCAACATTTTCTTTCTAAAGAACTACCTAGAACACAGTCAAGGGCAAGGTTTGACTGATAGCGAATTGCT  >  NC_002947/5005252‑5005405                                                                                                                                        |                   aTCAATTTAAGAATGCTGCCAAACGCGCTCTGCCGAATCAGCAACATCTCGCGTCGAAGCTTGGACTACATAGCCTTCGCCATAGCAACATTTTCTTTCTAAAGAACTACCTAGAACACAGTCAAGGGCAAGGttt                    <  2:320479/136‑1 (MQ=255)                   ccAAACGCGCTCTGCCGAATCAGCAACATCTCGCGTCGAAGCTTGGACTACATATCCTTCGCCATAGCAACATTTTCTTTCTAAATAACTACCTAGAACACAGTCAAGGGCAAGGTTTGACTGATAGCGAATTGCt  <  2:167/136‑1 (MQ=255)                                                                                                                                        |                   ATCAATTTAAGAATGCTGCCAAACGCGCTCTGCCGAATCAGCAACATCTCGCGTCGAAGCTTGGACTACATAGCCTTCGCCATAGCAACATTTTCTTTCTAAAGAACTACCTAGAACACAGTCAAGGGCAAGGTTTGACTGATAGCGAATTGCT  >  NC_002947/5005252‑5005405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑