| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,680,017 | T→G | 100% | T276P (ACC→CCC) | PP_1475 ← | CAIB/BAIF family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,680,017 | 0 | T | G | 100.0% | 50.5 / NA | 15 | T276P (ACC→CCC) | PP_1475 | CAIB/BAIF family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (9/6); total (9/6) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
GGCACTTCGGCAGTGGTCAGCACCTGCATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGTCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCA > NC_002947/1679896‑1680148 | ggCACTTCGGCAGTGGTCAGCACCTGCATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGa > 1:382268/1‑136 (MQ=255) tCAGCACCTGCATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGAt < 1:120048/136‑1 (MQ=255) aGCACCTGCATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACCCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGACATCGCGACCGATgg > 2:287285/1‑136 (MQ=255) gCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGc < 1:385411/136‑1 (MQ=255) gCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTgg > 1:508469/1‑136 (MQ=255) aGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGcc < 2:382268/136‑1 (MQ=255) gTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATc > 2:185635/1‑136 (MQ=255) cTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCg < 1:181011/136‑1 (MQ=255) gTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcg > 2:250499/1‑136 (MQ=255) gTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcg > 2:378977/1‑136 (MQ=255) gTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcg > 2:7149/1‑136 (MQ=255) tCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATAGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGgcgc > 2:19486/1‑136 (MQ=255) gCAGGTCGCGGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTtgtgtg < 2:495540/136‑1 (MQ=255) gcgGCCGTCGTTGCTGGCCAGGGGCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATggag > 1:153956/1‑136 (MQ=255) ggCTGGCCAGGGGCGGGTCGTTGGCGTGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCTTCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGAt < 1:287285/135‑1 (MQ=255) cggggcgggtcGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCa < 2:320504/135‑1 (MQ=255) | GGCACTTCGGCAGTGGTCAGCACCTGCATCAGTTGCTCCAGTGGCAGGCTGTTGGCCCAGCGGTCGATCACCCCATACAGCTCGTCACGACGCAGGTCGCGGCCGTCGTTGCTGGCCAGGGTCGGGTCGTTGGCGAGGTCATCGCGACCGATGGCCTGCATGAAGCGCTTGAAGATGGCATCACCGTTGGCGCCGATCTGCACATGCTTGCCGTCGGCGCTTGTGTGGATGGAGGAGGGCGTGATGCCCGGCA > NC_002947/1679896‑1680148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |