| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1 = | 0 (0.000) | 36 (0.680) | 19/264 | 0.9 | 100% | intergenic (–/+146) | –/parB | –/chromosome‑partitioning protein |
| ? | NC_002947 | = 6183851 | 0 (0.000) | intergenic (‑3/–) | atpI/– | ATP synthase protein I/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACAAC > NC_002947/1‑136 | ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc < 2:956484‑M1/8‑1 (MQ=255)ctgaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctc < 1:765457‑M1/8‑1 (MQ=255) gaccgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGctcct < 2:240922‑M1/10‑1 (MQ=255) cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg < 2:164271‑M1/13‑1 (MQ=255) cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg < 1:503225‑M1/13‑1 (MQ=255) cgaccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCgg < 1:264287‑M1/13‑1 (MQ=255) ccctttccactgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAg > 1:719403‑M1/121‑136 (MQ=255) ctgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaac > 2:482055‑M1/112‑136 (MQ=255) ctgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaac > 2:144186‑M1/112‑136 (MQ=255) tgccacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACcaaca > 2:1131562‑M1/111‑136 (MQ=255) cacaacaccaaggttgccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGt < 1:1006811‑M1/29‑1 (MQ=255) ccagcagcagtacgacaaattgagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCa < 2:807802‑M1/45‑1 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:240922‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:74693‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:761909‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:807802‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:94497‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 2:748075‑M1/71‑136 (MQ=255) gagccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgc > 1:1138540‑M1/71‑136 (MQ=255) gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATTACTTGGCATAATTTGTGCCGACaaaattata > 1:164271‑M1/69‑132 (MQ=255) gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc > 1:188472‑M1/69‑136 (MQ=255) gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc > 2:765457‑M1/69‑136 (MQ=255) gccagcagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATgcgc > 1:1191908‑M1/69‑136 (MQ=255) cagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCaga > 1:1079679‑M1/64‑136 (MQ=255) cagtaccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCaga > 1:1058766‑M1/64‑136 (MQ=255) ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGtata > 2:146860‑M1/59‑136 (MQ=255) ccggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGtata > 2:39425‑M1/59‑136 (MQ=255) cggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAg > 1:1307964‑M1/58‑136 (MQ=255) cggaaaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAg > 2:716‑M1/58‑136 (MQ=255) aaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGt > 2:264287‑M1/54‑136 (MQ=255) aaaaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGt > 2:503225‑M1/54‑136 (MQ=255) aaccgcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTgg > 1:956484‑M1/52‑136 (MQ=255) gcccagcgatggaaaggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTa < 2:496173‑M1/89‑1 (MQ=255) tggaatggcaggcggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTAtt > 2:652592‑M1/39‑136 (MQ=255) cggtttggcgtgcgtatttccatcacAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGt < 2:457342‑M1/110‑1 (MQ=255) acAACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACa > 2:1052439‑M1/3‑136 (MQ=255) aaCTGCTCCTCGGAAGTCGACCAAGAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTacaac < 2:1349301/136‑1 (MQ=255) aaCTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTacaac < 2:779025/136‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTGCTCCTCGGAAGTCGACCAACAAGTCAGCTATGACTTGGCATAATTTGTGCCGACAAAATGCGCGCAGAGTATAGGGGTGGATTAACCCCTATTCAACTCTTCGGTAGTGATTTCCGACTTCACGCTACAAC > NC_002947/1‑136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |