New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1617825 = | 19 (0.360) | 8 (0.170) | 6/234 | 2.5 | 30.9% | intergenic (‑38/+135) | PP_1417/PP_1418 | tricarboxylate transport protein TctB/tricarboxylate transport protein TctC |
? | NC_002947 | 1617914 = | 19 (0.410) | intergenic (‑127/+46) | PP_1417/PP_1418 | tricarboxylate transport protein TctB/tricarboxylate transport protein TctC |
GCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGA > NC_002947/1617691‑1617911 | catgaccggcgaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGa < 2:122800‑M1/2‑1 (MQ=255) tgaccggcgaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATc < 2:96557‑M1/4‑1 (MQ=255) ggccaTCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCgg > 2:1165105/1‑136 (MQ=255) cgaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGcgcg > 1:96557‑M1/126‑136 (MQ=255) cgaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGcgcg > 1:460505‑M1/126‑136 (MQ=255) gaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGa > 1:83658‑M1/125‑136 (MQ=255) gaagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGa > 1:111481‑M1/125‑136 (MQ=255) tccccatggtcggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGaa > 1:841711‑M1/124‑136 (MQ=255) aagagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGaa > 1:66098‑M1/124‑136 (MQ=255) aCGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGGCGCGATCGGGCGCGaa < 1:1028213/136‑1 (MQ=255) gagctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgcgtcgcGATCGGGCGCGAAGc < 2:3541‑M1/15‑1 (MQ=255) gctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGAAGCTg > 1:1177626‑M1/120‑136 (MQ=255) ctggacggctatgtgaagaagcaagtggctgactacaaggcgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgcgtcgcGATCGGGCGCGAAGCTGc > 1:3541‑M1/119‑136 (MQ=255) cggcACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAACTGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTa < 2:496868/136‑1 (MQ=255) cacacaTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAAc < 1:1122743/136‑1 (MQ=255) aTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGcc < 1:1165105/136‑1 (MQ=255) aTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGcc < 1:780833/136‑1 (MQ=255) aTCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGcc < 1:643469/136‑1 (MQ=255) cagcagGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGTGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGTTGc < 2:1260518/136‑1 (MQ=255) cagcagGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc < 1:821516/136‑1 (MQ=255) cagcagGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc < 1:184391/136‑1 (MQ=255) cAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc < 1:1347262/127‑1 (MQ=255) cAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGc > 2:1347262/1‑127 (MQ=255) ggCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGaa < 1:986121/136‑1 (MQ=255) gCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCTATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAg < 1:1200825/136‑1 (MQ=255) cgctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATc > 1:418319‑M1/79‑136 (MQ=255) gctggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg > 1:656237‑M1/78‑136 (MQ=255) gTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg < 2:1355388/136‑1 (MQ=255) gTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg < 2:911272/136‑1 (MQ=255) ggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGcgcg > 2:1022262‑M1/75‑85 (MQ=255) ggccaaggaattcggcctgatccagtaagcctgtcggactcaccaccactcctgtgggagcggccttgtgtcggGATCGGGcgcg < 1:1022262‑M1/11‑1 (MQ=255) gggATGGCTAAAGTCAAATCAAACTCCTGTGGCTGCGGCGTGGCGGCGCGTTGGGGCGCGAAGCGGCCGCTAAACCTGCCGTGGCTTTCTGTCCCATCCATCTTATCGGCTGTGCAAGGGGCCGCTTCGCGCCCGa < 2:879513/136‑1 (MQ=255) ggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATc > 2:1090631‑M1/19‑71 (MQ=255) ggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATc < 1:1090631‑M1/53‑1 (MQ=255) ggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg > 1:906332‑M1/19‑77 (MQ=255) ggagcggccttgtgtcggGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCg < 2:906332‑M1/59‑1 (MQ=255) ggAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTg > 2:1077604/1‑35 (MQ=255) ggAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTg < 1:1077604/35‑1 (MQ=255) | GCCAGGCCATCACGGCCAGGGCGGCACACATCGCCAGCAGGGCCAAGGCGAAAATGCGTTGAAGGATCATTGGGGAATCCTCGTTGGGATTGCTCAAGTGAAATGCAAATCCTGTGGGAGCGGCCTTGCGTCGCGATCGGGCGCGAAGCTGCCGCTAAACCTGCCGATGCGATCTGTACGAAGCATCGTATCGGCTGTGCCAGGGGCCGCTTCGCGCCCGA > NC_002947/1617691‑1617911 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |