| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,800,674 | Δ1 bp | 5.7% | coding (191/831 nt) | PP_3358 ← | hydroxycinnamoyl‑CoA hydratase‑lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,800,674 | 0 | T | . | 5.7% | 535.7 / 24.3 | 158 | coding (191/831 nt) | PP_3358 | hydroxycinnamoyl‑CoA hydratase‑lyase |
| Reads supporting (aligned to +/- strand): ref base T (72/77); new base . (3/6); total (75/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 158 total aligned reads displayed.
ACCATGGCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATGCCCGCTTC > NC_002947/3800527‑3800819 | ccATGGCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGc < 2:5392932/150‑1 (MQ=255) cATGGCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGcc > 1:5188229/1‑150 (MQ=255) tGGCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCgg < 1:1162479/150‑1 (MQ=255) ggCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGAGTCCTGGAC‑CGCCGGc < 2:4074674/150‑1 (MQ=255) gCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCTGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGAGTCCTGGAC‑CGCCGGCa < 1:4162409/150‑1 (MQ=255) gCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCTGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGAGTCCTGGAC‑CGCCGGCa < 1:3333585/150‑1 (MQ=255) gCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGAGTCCTGGAC‑CGCCGGCa < 2:1109634/150‑1 (MQ=255) aTGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCg < 1:3942269/150‑1 (MQ=255) aTGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCg < 2:3902227/150‑1 (MQ=255) ggTCGGTTTGTCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGt < 1:1994882/150‑1 (MQ=255) ggTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGt < 1:1684657/150‑1 (MQ=255) gTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTc < 1:4296772/150‑1 (MQ=255) tGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCa < 1:2856553/150‑1 (MQ=255) tGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCa > 2:3369488/1‑150 (MQ=255) gCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGc > 2:730469/1‑150 (MQ=255) gCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGc > 2:730468/1‑150 (MQ=255) cAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGcc > 2:1424439/1‑150 (MQ=255) aGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCca < 2:4233733/150‑1 (MQ=255) aGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCca > 2:2751042/1‑150 (MQ=255) aGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCca < 2:4233764/150‑1 (MQ=255) aCGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAATTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagc < 1:3152963/150‑1 (MQ=255) aCGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagc > 1:4767245/1‑150 (MQ=255) aCGCAGCAACTTCCATTACCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagc < 1:5222606/150‑1 (MQ=255) gcagcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgt > 1:3394713/1‑150 (MQ=255) agcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGTAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgtca < 1:517616/150‑1 (MQ=255) agcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgtca > 1:4586529/1‑150 (MQ=255) agcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgtca > 1:4440782/1‑150 (MQ=255) agcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgtca < 1:965542/150‑1 (MQ=255) gcaACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCcagcgtcag > 2:2992252/1‑150 (MQ=255) cTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCagcgtcagcgtc < 1:2474645/150‑1 (MQ=255) ttCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTcc > 1:3288441/1‑150 (MQ=255) tCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCt < 2:585741/150‑1 (MQ=255) ttgccattgcGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTc > 2:4975636/1‑150 (MQ=255) gccattgcGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCaa > 2:3967970/1‑150 (MQ=255) ccattgcGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAg < 1:1606071/150‑1 (MQ=255) cattgcGACGCTACGCGACGAATCTTTTCCTGGAGGATATCCGGGCCGGCCTCAACAACGCGGAAGAAATCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCTCAGGAACCCCACAATACCAGCACGCAAGCGTCAGCGTCCTGCTCAAgg > 2:822302/1‑150 (MQ=255) tgcGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGtt < 2:1089702/150‑1 (MQ=255) gcGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGttt > 2:3794602/1‑150 (MQ=255) cGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTc < 2:307024/150‑1 (MQ=255) cGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTc < 2:3251291/150‑1 (MQ=255) gAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTcc > 2:1537670/1‑150 (MQ=255) gAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTcc > 2:1537680/1‑150 (MQ=255) aGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCa < 2:3413604/150‑1 (MQ=255) ggCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAg < 2:1726017/150‑1 (MQ=255) ggCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAg < 2:1725854/150‑1 (MQ=255) ggCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAg < 2:3952685/150‑1 (MQ=255) gCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGc < 1:976729/150‑1 (MQ=255) ttCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCAc > 2:2024305/1‑150 (MQ=255) cgcgACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCACCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGt > 1:3950112/1‑150 (MQ=255) gacgaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGa < 1:2177994/150‑1 (MQ=255) gacgaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGa < 2:4736817/150‑1 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCCGCGTCAGCGTCCGGCTCCAGGGTTTCCAGCACGTCGACCa > 1:438112/1‑150 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAg > 1:4852015/1‑130 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCa > 1:3624248/1‑150 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCa > 2:4166933/1‑150 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCa > 1:21072/1‑150 (MQ=255) gaATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCa > 1:1440165/1‑150 (MQ=255) aTCTTTTCCTGGAGGATTTCAGGGCCGGCGTCCACCTCGAGGAAGTACTCCTTCAGGTCCATGCCGGAG‑TTCCAGTACTCGCCGGCACCGGTCAATACCAGCACGCCATCGTCAGCGTCCTGCTCAAGGGTTTACAGCACGTCGACCAtt < 1:2319556/150‑1 (MQ=255) tCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCAttt > 1:3427998/1‑150 (MQ=255) tCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCAttt > 1:84374/1‑150 (MQ=255) tttCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTccc < 1:2732636/150‑1 (MQ=255) ttCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCg > 2:5351786/1‑150 (MQ=255) tCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCgg > 2:1950355/1‑150 (MQ=255) cTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGtt > 1:3848400/1‑150 (MQ=255) tGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTcc > 2:372048/1‑126 (MQ=255) tGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTc > 2:3809596/1‑150 (MQ=255) tGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACCCCAGCGTCAGCGTCCTGCACAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTc > 1:776418/1‑150 (MQ=255) ggaggaTTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCa < 1:2664068/150‑1 (MQ=255) aggaTTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGc > 1:316911/1‑126 (MQ=255) gaTTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGt < 2:131927/150‑1 (MQ=255) ttCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTggg < 1:1776495/150‑1 (MQ=255) ttCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTggg < 2:4858100/150‑1 (MQ=255) cGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCt < 2:4753700/150‑1 (MQ=255) gggCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTc > 1:1041766/1‑150 (MQ=255) ccGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATg < 1:1027496/150‑1 (MQ=255) ccGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATg < 2:2719627/150‑1 (MQ=255) ccGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATg < 2:3604717/150‑1 (MQ=255) gCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCa > 1:5436786/1‑150 (MQ=255) ccACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGc < 2:3456602/150‑1 (MQ=255) ccTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCAAGGCATTGCGtt > 1:4702393/1‑150 (MQ=255) cTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGttt > 2:2149648/1‑150 (MQ=255) cTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGttt < 2:561838/150‑1 (MQ=255) cTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGttt < 2:5240759/150‑1 (MQ=255) cgcgGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGttttt > 2:2116740/1‑150 (MQ=255) cgGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTcc < 2:5308250/150‑1 (MQ=255) gTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCg > 2:310813/1‑150 (MQ=255) tACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGa > 2:4304502/1‑150 (MQ=255) ccTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGa < 1:5328638/150‑1 (MQ=255) ccTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGa > 2:2192696/1‑150 (MQ=255) cTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCAc < 1:145889/90‑1 (MQ=255) cTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCAc > 2:145889/1‑90 (MQ=255) cTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAg < 1:1121829/150‑1 (MQ=255) gTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCAc > 2:5169239/1‑150 (MQ=255) ccGGCGAGTCCTGGAC‑CGCCGGCATCGGTCAATACCAGCACGCCAGCGTCCGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCg > 1:3817511/1‑150 (MQ=255) cggcg‑gTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGa > 2:4852671/1‑150 (MQ=255) ggcg‑gTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGAt < 1:2646295/150‑1 (MQ=255) gcg‑gTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATg < 1:282069/150‑1 (MQ=255) ccatcTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATGCCCGCtt < 2:514392/146‑1 (MQ=255) ccatcTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATGCCCGCtt < 2:3241485/146‑1 (MQ=255) aGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATGCCCGCtt > 2:5231357/1‑150 (MQ=255) | ACCATGGCGATGGTCGGTTTGGCATACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCG‑GTCCAGGACTCGCCGGCACCGGTCAATACCAGCACGCCAGCGTCAGCGTCCTGCTCAAGGGTTTCCAGCACGTCGACCATTTCCCGGTTCAGGGTGGGGCTCATGGCATTGCGTTTTTCCGGGCGATTGAGGGTCACCCAGGCGATGCCCGCTTC > NC_002947/3800527‑3800819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |