| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,251,609 | Δ1 bp | 5.1% | coding (239/603 nt) | PP_1094 ← | electron transport complex protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,251,609 | 0 | C | . | 5.1% | 655.1 / 27.9 | 195 | coding (239/603 nt) | PP_1094 | electron transport complex protein |
| Reads supporting (aligned to +/- strand): ref base C (90/95); new base . (2/8); total (92/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
CAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATGACCGG > NC_002947/1251461‑1251757 | gCCTGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGt > 1:1063776/1‑150 (MQ=255) gCCTGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGt > 1:5051850/1‑150 (MQ=255) cccGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTa < 1:5217610/150‑1 (MQ=255) ccGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTaa < 2:3145325/150‑1 (MQ=255) gCTTTCCTGTTGTTCGACATCCGGGCTGCCGCTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCGGGGCCTGTGTGATCAGGAGAATGGCGCTGGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa < 2:3505219/150‑3 (MQ=255) gCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa < 1:2903167/150‑3 (MQ=255) ttCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAg < 2:1170533/150‑1 (MQ=255) cTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGAt < 1:4274918/150‑1 (MQ=255) ttgttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCCCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACg > 1:1109291/1‑150 (MQ=255) gACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTAtt > 2:591600/1‑150 (MQ=255) aCAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTg > 1:3150520/1‑150 (MQ=255) aCAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTg > 1:2736635/1‑150 (MQ=255) cAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg > 1:1564365/1‑150 (MQ=255) cAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg < 1:271104/150‑1 (MQ=255) aaCCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTggg > 1:3689356/1‑150 (MQ=255) cTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCct > 2:1431175/1‑150 (MQ=255) cTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCct > 2:3918361/1‑150 (MQ=255) gATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGGCTCTGTgcggc > 2:2076091/1‑150 (MQ=255) gATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggc > 2:484736/1‑150 (MQ=255) aTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggcg > 2:5018819/1‑150 (MQ=255) aTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggcg < 1:1545298/150‑1 (MQ=255) tCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGcggcgg < 1:2374637/150‑1 (MQ=255) tCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGcggcgg < 1:1213499/150‑1 (MQ=255) gccggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGcc > 1:4882405/1‑150 (MQ=255) gccggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGcc > 1:4173902/1‑150 (MQ=255) ccggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCt > 2:1551841/1‑150 (MQ=255) cggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCtt < 1:3244077/150‑1 (MQ=255) cggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCtt < 1:349352/150‑1 (MQ=255) ggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTg < 2:4781133/150‑1 (MQ=255) gccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTgg < 2:4652780/150‑1 (MQ=255) gccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTgg < 2:2184623/150‑1 (MQ=255) cgtccgtGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCa > 1:1448732/1‑150 (MQ=255) cgtGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCgg < 2:3281526/150‑1 (MQ=255) tgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt > 1:1700215/1‑150 (MQ=255) aTGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTcc > 2:3386992/1‑150 (MQ=255) ggCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAg < 1:3543653/150‑1 (MQ=255) ggCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAg < 2:1935323/150‑1 (MQ=255) cGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAggg < 2:2533264/150‑1 (MQ=255) cGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAggg < 2:2855419/150‑1 (MQ=255) cTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 2:4544050/150‑1 (MQ=255) cTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 1:3396983/150‑1 (MQ=255) tCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGt < 1:4649997/150‑1 (MQ=255) cAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTTTTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGTGCTTTCCAGGGGCTGGtt < 2:4099935/150‑1 (MQ=255) cAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt < 2:2969836/150‑1 (MQ=255) cAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt < 1:1992417/150‑1 (MQ=255) gCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTCTTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGt > 2:4206520/1‑150 (MQ=255) gCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGt > 2:4206263/1‑150 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 1:1810081/150‑1 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 2:3712986/150‑1 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 1:1809776/150‑1 (MQ=255) cGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCAt < 2:1700306/150‑1 (MQ=255) ggCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTa < 2:1765860/150‑1 (MQ=255) gCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAc > 1:5306385/1‑150 (MQ=255) gCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAc > 2:5155156/1‑150 (MQ=255) cccGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAcc > 1:4144333/1‑150 (MQ=255) ccGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCg > 1:220043/1‑150 (MQ=255) ggCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATGGCTACCGTc > 1:2352134/1‑150 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 1:4527627/150‑1 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 2:2674225/150‑1 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 1:3984407/150‑1 (MQ=255) cccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgcagc > 2:885546/1‑150 (MQ=255) ccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgcagca > 2:3673070/1‑150 (MQ=255) cTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCAc > 2:3301105/1‑150 (MQ=255) tGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACg < 1:885546/150‑1 (MQ=255) gggCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACgg < 1:4049922/150‑1 (MQ=255) gCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGcc < 1:73205/150‑1 (MQ=255) tgtgtgATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGc > 1:1279819/1‑150 (MQ=255) gATCAGGATAATGGCGCGTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTGGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTg > 2:2771068/1‑150 (MQ=255) aTCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTgg > 2:3262044/1‑150 (MQ=255) gATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCt > 1:2720112/1‑150 (MQ=255) aTAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCtt < 2:2574727/150‑1 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt > 1:2959367/1‑93 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt < 2:2959367/93‑1 (MQ=255) aTGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGc < 1:3424872/150‑1 (MQ=255) tGGCGCTTGGCTTTCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCAGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCa < 2:2051782/150‑1 (MQ=255) ggCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc < 2:648653/121‑1 (MQ=255) ggCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc > 1:648653/1‑121 (MQ=255) cgcTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGGCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgct < 1:2076091/150‑1 (MQ=255) cgcTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgct < 1:1445114/150‑1 (MQ=255) ggcggCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCggg < 1:1397568/78‑1 (MQ=21) cTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgctgc > 1:4273897/1‑150 (MQ=255) gCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt < 2:3626159/94‑1 (MQ=37) gCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt > 1:3626159/1‑94 (MQ=37) cTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTc < 2:723966/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2977961/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2736635/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2482024/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 1:2572179/150‑1 (MQ=255) gaCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAg < 2:2412522/149‑1 (MQ=255) aCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAg < 2:786255/97‑1 (MQ=255) tGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGcc > 2:815342/1‑150 (MQ=255) gCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCg > 1:1258426/1‑150 (MQ=255) ccATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCgg < 1:3918361/150‑1 (MQ=255) aTAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCg < 1:3071433/150‑1 (MQ=255) aTAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCg < 1:3734895/150‑1 (MQ=255) tAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGa > 2:622822/1‑150 (MQ=255) gCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCgtgctct > 1:55050/1‑144 (MQ=255) gCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgacc < 1:1157221/150‑1 (MQ=255) gCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgacc < 2:1109291/150‑1 (MQ=255) aCGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATgaccgg > 1:4495438/1‑150 (MQ=255) | CAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGCCGGCGATGACCGG > NC_002947/1251461‑1251757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |