Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,772,189:1 +A 7.8% intergenic (‑90/+19) PP_2422 ← / ← lpxOA hypothetical protein/Fe(2+)/alpha‑ketoglutarate‑dependent dioxygenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,772,1891.A 7.8% 673.0 / 52.6 166intergenic (‑90/+19)PP_2422/lpxOAhypothetical protein/Fe(2+)/alpha‑ketoglutarate‑dependent dioxygenase
Reads supporting (aligned to +/- strand):  ref base . (90/63);  new base A (8/5);  total (98/68)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01

Only 100 of 168 total aligned reads displayed.

CGGCCATTAACTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACAGGCGG  >  NC_002947/2772045‑2772337
                                                                                                                                                 |                                                                                                                                                    
cGGCCATTAACTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGc                                                                                                                                                 <  1:4931171/150‑1 (MQ=255)
  gCCATTAACTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCt                                                                                                                                               >  1:4579889/1‑150 (MQ=255)
   ccATTAACTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGCCACCGTACGAGTGACCTg                                                                                                                                              <  1:2849591/150‑1 (MQ=255)
      ttAACTGCTTACGGTAGGCTTCCCAGTCCATCATGCTCTTCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGTCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCTCTCGTAAGGTTGCCTGCGt                                                                                                                                           <  2:497536/150‑1 (MQ=255)
        aaCTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGt                                                                                                                                                    <  1:1680079/139‑1 (MQ=255)
         aCTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGa                                                                                                                                        >  2:3349101/1‑150 (MQ=255)
           tGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGc                                                                                                                                      >  2:1225492/1‑150 (MQ=255)
             cTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCt                                                                                                                                    >  2:2835365/1‑150 (MQ=255)
              ttACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCtt                                                                                                                                   >  1:3757588/1‑150 (MQ=255)
              ttACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCtt                                                                                                                                   >  1:2340844/1‑150 (MQ=255)
               tACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTc                                                                                                                                  >  1:4719700/1‑150 (MQ=255)
               tACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTc                                                                                                                                  <  2:1279630/150‑1 (MQ=255)
               tACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTc                                                                                                                                  <  2:5165583/150‑1 (MQ=255)
                aCGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCa                                                                                                                                 <  2:1592991/150‑1 (MQ=255)
                  ggTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGa                                                                                                                               >  2:3783853/1‑150 (MQ=255)
                  ggTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGCCACCGTACGAGTGACCTGc                                                                                                                                             <  1:2015019/136‑1 (MQ=255)
                  ggTAGGCGACCCAGTACATAATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGa                                                                                                                               >  2:3783712/1‑150 (MQ=255)
                     aGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGt                                                                                                                            >  1:3847919/1‑150 (MQ=255)
                        cGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGa                                                                                                                         <  2:4509922/150‑1 (MQ=255)
                            ccAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGaa                                                                                                                     >  2:483918/1‑150 (MQ=255)
                             cAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAac                                                                                                                    >  2:1528664/1‑150 (MQ=255)
                                   atcatGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGtt                                                                                                                                          >  1:1558258/1‑122 (MQ=255)
                                   atcatGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGc                                                                                                              >  1:1149922/1‑150 (MQ=255)
                                     catGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCAc                                                                                                            >  1:203585/1‑150 (MQ=255)
                                      atGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCAcc                                                                                                           <  2:1281734/150‑1 (MQ=255)
                                          tCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGt                                                                                                                                                    >  1:3624015/1‑105 (MQ=255)
                                          tCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGt                                                                                                                                                    <  2:3624015/105‑1 (MQ=255)
                                          tCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCa                                                                                                                                 >  1:2594076/1‑124 (MQ=255)
                                          tCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCa                                                                                                                                 <  2:2594076/124‑1 (MQ=255)
                                           cATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAAcgc                                                                                                      >  1:4272505/1‑150 (MQ=255)
                                            aTCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGAt                                                                                                                        <  1:5327271/131‑1 (MQ=255)
                                                tCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCATTCATATGTAGATGAACACCAGCACCAACGCCGCGa                                                                                                 >  2:1615330/1‑150 (MQ=255)
                                                  ttCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGAcc                                                                                               >  1:4089396/1‑150 (MQ=255)
                                                  ttCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGAcc                                                                                               >  1:4399998/1‑150 (MQ=255)
                                                       cTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGc                                                                                          >  1:774303/1‑150 (MQ=255)
                                                         tGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGccc                                                                                        <  2:4399998/150‑1 (MQ=255)
                                                         tGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGccc                                                                                        >  2:195544/1‑150 (MQ=255)
                                                               ttGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCAttttt                                                                                  <  1:2601465/150‑1 (MQ=255)
                                                                tGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTc                                                                                 <  2:268799/150‑1 (MQ=255)
                                                                 gCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTcc                                                                                <  2:1185112/150‑1 (MQ=255)
                                                                   gAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAg                                                                              >  2:1001442/1‑150 (MQ=255)
                                                                   gAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAg                                                                              >  1:1345088/1‑150 (MQ=255)
                                                                    aGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAgg                                                                             <  2:342702/150‑1 (MQ=255)
                                                                        gAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGgtagt                                                                         >  2:1594203/1‑150 (MQ=255)
                                                                         aGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGgtagta                                                                        <  1:5239514/150‑1 (MQ=255)
                                                                           cTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACg                                                                                                                                                       >  1:1380063/1‑70 (MQ=255)
                                                                           cTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACg                                                                                                                                                       <  2:1380063/70‑1 (MQ=255)
                                                                           cTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAgc                                                                      >  1:3717916/1‑150 (MQ=255)
                                                                                  gCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCg                                                               >  2:1942237/1‑150 (MQ=255)
                                                                                    tAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGAAGCGCaaccgca                                                             >  2:2755923/1‑144 (MQ=255)
                                                                                         gAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTgcgc                                                        >  1:1877177/1‑150 (MQ=255)
                                                                                            gCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGcttc                                                     >  2:2918719/1‑150 (MQ=255)
                                                                                            gCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGcttc                                                     <  1:1676201/150‑1 (MQ=255)
                                                                                              gTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGcttctt                                                   <  2:4579889/150‑1 (MQ=255)
                                                                                                  cACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTATATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCAACCGCATGCGctactacctg                                               <  1:3349101/150‑6 (MQ=255)
                                                                                                  cACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAgc                                               <  2:3257582/150‑1 (MQ=255)
                                                                                                  cACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAgc                                               <  2:531802/150‑1 (MQ=255)
                                                                                                  cACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGAAGCGCAACCGCATGCGctactacctg                                               <  1:2755923/150‑6 (MQ=255)
                                                                                                    cGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAgcgc                                             <  1:1231972/150‑1 (MQ=255)
                                                                                                      tGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCacccgac                                           >  1:5194462/1‑144 (MQ=255)
                                                                                                         gAGGCGGTACTTTGGTGGGTAATCGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCTGCGCCTTGc                                        >  1:4825642/1‑150 (MQ=255)
                                                                                                         gAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGc                                        >  2:1833198/1‑150 (MQ=255)
                                                                                                         gAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGc                                        >  1:438399/1‑150 (MQ=255)
                                                                                                           ggCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCa                                      >  2:3552770/1‑150 (MQ=255)
                                                                                                                tACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTcc                                                                                <  1:2911728/103‑1 (MQ=255)
                                                                                                                tACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTcc                                                                                >  2:2911728/1‑103 (MQ=255)
                                                                                                                tACTTTGGTGGGTAAACGCAGGTCACTCGTACGGCGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGcc                                       <  1:2220569/144‑1 (MQ=255)
                                                                                                                tACTTTGGTGGGTAAACGCAGGTCACTCGTACGGCGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGcc                                       >  2:2220569/1‑144 (MQ=255)
                                                                                                                   tttGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTcgcg                              >  1:275084/1‑150 (MQ=255)
                                                                                                                          ggTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTg                       <  1:1264185/150‑1 (MQ=255)
                                                                                                                          ggTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTg                       <  1:2544711/150‑1 (MQ=255)
                                                                                                                           gTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGt                      >  2:4134556/1‑150 (MQ=255)
                                                                                                                           gTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATATTTCCAGCTACTAGCGCATGCGGTTGCGCTTCTACAGCGCCTTGCCACGCTCGCGGATCTTGt                      >  1:4150023/1‑150 (MQ=255)
                                                                                                                            tcaaCGCAGGCCACCGTACGAGTGACCTGCGTTTAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTa                     >  1:3598052/3‑150 (MQ=255)
                                                                                                                            tcaaCGCAGGCCACCGTACGAGTGACCTGCGTTTAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTa                     >  1:3597968/3‑150 (MQ=255)
                                                                                                                            tcaaCGCAGGCCACCGTACGAGTGACCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCCGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTcgc                               <  1:307004/138‑1 (MQ=255)
                                                                                                                            tcaaCGCAGGCCACCGTACGAGTGACCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTcgc                               >  2:307004/3‑140 (MQ=255)
                                                                                                                            tAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTa                     >  1:3375471/1‑150 (MQ=255)
                                                                                                                               aCGCAGGCCACCGTACGAGTGACCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTa                     <  1:921099/147‑1 (MQ=255)
                                                                                                                               aCGCAGGCCACCGTACGAGTGACCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGAt                  >  2:1976853/1‑150 (MQ=255)
                                                                                                                                 gCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACATCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGc                >  1:964328/1‑150 (MQ=255)
                                                                                                                                 gCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACATCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGc                >  1:964514/1‑150 (MQ=255)
                                                                                                                                 gCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCtt                        <  2:3243821/142‑1 (MQ=255)
                                                                                                                                 gCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCtt                        >  1:3243821/1‑142 (MQ=255)
                                                                                                                                 gCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGc                >  1:304245/1‑150 (MQ=255)
                                                                                                                                   aGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCgg              >  1:2376105/1‑150 (MQ=255)
                                                                                                                                   aGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCgg              <  2:3833399/150‑1 (MQ=255)
                                                                                                                                   aGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCgg              <  1:2431136/150‑1 (MQ=255)
                                                                                                                                   aGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCgg              <  2:5120023/150‑1 (MQ=255)
                                                                                                                                   aGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCgg              >  1:5419795/1‑150 (MQ=255)
                                                                                                                                    ggTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCggg             <  2:534444/150‑1 (MQ=255)
                                                                                                                                     gTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGt            <  2:2340844/150‑1 (MQ=255)
                                                                                                                                        caccGTACGAGTGACCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGc                                                                >  2:548669/4‑96 (MQ=255)
                                                                                                                                          tCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACa       >  1:2763327/1‑150 (MQ=255)
                                                                                                                                          tCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACa       >  2:3984447/1‑150 (MQ=255)
                                                                                                                                          tCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACa       >  2:2159159/1‑150 (MQ=255)
                                                                                                                                           cGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACAg      <  1:5426384/150‑1 (MQ=255)
                                                                                                                                             tACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACAGGc    >  2:2435082/1‑150 (MQ=255)
                                                                                                                                              aCGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACAGGCg   <  2:5302488/150‑1 (MQ=255)
                                                                                                                                               cGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTAAACAGGCgg  >  2:1736479/1‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CGGCCATTAACTGCTTACGGTAGGCGTCCCAGTCCATCATGCTCATCGTCTTCACCTTGGGGGTTGCGAGTGGAGCTTTCAGGCTAGTCGAAGCGTGGCACGTGCGAGGCGGTACTTTGGTGGGTAAACGCAGGTCACTCGTACGGTGGCCTGCGTTGAGCCTTCAGATGTAGATGAACACCAGCACCAACGCCGCGACCACTGCCCATTTTTCCAGGTAGTAGCGCATGCGGTTGCGCTTCTTCAGCGCCTTGCCACGCTCGCGGATCTTGTAGATGCGGGTGAACAGGCGG  >  NC_002947/2772045‑2772337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: