| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,770,939:1 | +C | 5.8% | coding (10295/10413 nt) | pvdD ← | non‑ribosomal peptide synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,770,939 | 1 | . | C | 5.8% | 771.9 / 37.5 | 173 | coding (10295/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
| Reads supporting (aligned to +/- strand): ref base . (63/100); new base C (4/6); total (67/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
CAGAGGGGCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGA > NC_002947/4770791‑4771083 | cAGAGGGGCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAg‑‑t > 1:536951/1‑150 (MQ=255) agGGGCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTc < 1:3262759/150‑1 (MQ=255) ggCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAg < 1:2528963/150‑1 (MQ=255) gCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAgg < 1:5001736/150‑1 (MQ=255) gCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAgg < 1:2519054/150‑1 (MQ=255) ccGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAggg > 2:4847509/1‑150 (MQ=255) cgcTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCt < 1:2277298/150‑1 (MQ=255) gcTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTg < 2:1098036/150‑1 (MQ=255) tGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGc > 1:3107654/1‑150 (MQ=255) ccccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCt < 1:644044/150‑1 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg > 1:2593993/1‑150 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg > 1:4355405/1‑150 (MQ=255) cccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTg > 1:1156432/1‑150 (MQ=255) ccGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTgc < 1:4781856/150‑1 (MQ=255) gAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACactgcgc < 2:2327625/150‑7 (MQ=255) gAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTgcgc > 1:3923639/1‑150 (MQ=255) aaaGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGcgcg > 1:509333/1‑150 (MQ=255) cTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATG‑TGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa > 2:4304939/1‑150 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCGGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgc > 1:2982587/1‑147 (MQ=37) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:27183/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa > 2:4894267/1‑150 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:2201522/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:3022426/150‑1 (MQ=255) tCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCaa < 2:1313151/150‑1 (MQ=255) cATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCGGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgct < 2:2982587/150‑5 (MQ=37) cATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCACATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctgct < 1:2535848/150‑5 (MQ=37) aTGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAgg < 2:1294926/150‑1 (MQ=255) aaaGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCtt < 1:1049188/150‑1 (MQ=255) ttCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTcgcg > 2:2814270/1‑150 (MQ=255) tCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGATTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCTCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCgcgc < 2:4014653/150‑1 (MQ=255) tGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCAt > 2:4153179/1‑150 (MQ=255) gAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCaa > 1:1453696/1‑122 (MQ=255) aaGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCGGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCg > 1:480202/1‑150 (MQ=255) aGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTcg < 1:2294935/140‑1 (MQ=255) cAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCa > 2:4751971/1‑150 (MQ=255) ggCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACg < 1:3688972/150‑1 (MQ=255) gcgtgcgtGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACgg > 1:45866/1‑150 (MQ=255) gcgtgcgtGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACgg < 1:2352208/150‑1 (MQ=255) tgcgtgAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGccc < 1:4573502/150‑1 (MQ=255) tgcgtgAGGTTGGGTTCGAGCAGCGCTGGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGccc < 2:1448154/150‑1 (MQ=255) gAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTAc < 2:1050445/150‑1 (MQ=255) gTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACcca < 1:633039/150‑1 (MQ=255) ttGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACccac > 2:1491151/1‑150 (MQ=255) ttGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACccac < 2:753583/150‑1 (MQ=255) ttGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACccac < 2:754451/150‑1 (MQ=255) gTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGctg > 2:2542836/1‑109 (MQ=25) gcagcGCTTGTACGTCGTCGAGCAGGGTGGCCACATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCg > 2:3959554/1‑150 (MQ=255) gcgcTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTa < 1:4143869/150‑1 (MQ=255) gcgcTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTa > 2:2893468/1‑150 (MQ=255) cTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACtgtg > 2:4366349/1‑142 (MQ=255) aCGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGc < 1:4367904/150‑1 (MQ=255) aCGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGc > 1:1230134/1‑150 (MQ=255) cgtcgAGCAGGGTGGCCTCCTGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACgg < 2:3501264/150‑1 (MQ=255) gtcgAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACggg < 1:2179039/150‑1 (MQ=255) gtcgAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACggg > 2:1993285/1‑150 (MQ=255) tgacccAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑GGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGc > 2:4591665/6‑150 (MQ=255) tcgAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGc > 1:4701070/1‑150 (MQ=255) cgAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCt < 1:4866653/150‑1 (MQ=255) gCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGc < 1:2602616/150‑1 (MQ=255) gCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGc > 1:1992780/1‑150 (MQ=255) cgggTGGCCTCATGCGGCACCTGGCAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGGACCACCTGCACGGGCTGGCAc < 2:5049583/149‑1 (MQ=255) ggTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACgt < 2:1000832/150‑1 (MQ=255) ggTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACgt < 2:2894750/150‑1 (MQ=255) gCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGc > 1:783076/1‑150 (MQ=255) ccTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCa < 2:3107654/150‑1 (MQ=255) ccTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCa < 2:783148/150‑1 (MQ=255) cTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAg > 1:4629181/1‑150 (MQ=255) cTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAg > 1:4629418/1‑150 (MQ=255) cTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAg < 2:3163923/150‑1 (MQ=255) tCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGc > 2:585031/1‑150 (MQ=255) aTGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTc > 1:3484858/1‑150 (MQ=255) gCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCAc < 2:2283500/150‑1 (MQ=255) ggCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCAcgc < 1:5449740/150‑1 (MQ=255) gCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCAcgcg > 2:1903084/1‑150 (MQ=255) aCCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGAc < 2:1156432/150‑1 (MQ=255) aaGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGgcgc < 2:4027884/150‑1 (MQ=255) aaGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGgcgc < 1:3373706/150‑1 (MQ=255) tGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTg < 2:1710699/150‑1 (MQ=255) tGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTg < 1:5347484/150‑1 (MQ=255) gCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACGAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGa < 2:536827/150‑1 (MQ=255) gCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGa < 2:537562/150‑1 (MQ=255) ccACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCtt < 2:4555571/146‑1 (MQ=255) acaGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCt > 1:1867560/1‑150 (MQ=255) acaGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCt > 2:2091019/1‑150 (MQ=255) gcgcaggcagcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgc > 2:1400361/7‑150 (MQ=255) aGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgc < 1:5094641/150‑1 (MQ=255) ggCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgcg < 2:321684/150‑1 (MQ=255) gCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgcgc < 1:2948056/150‑1 (MQ=255) ccAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTgcgcg < 2:3058579/150‑1 (MQ=255) ttggcCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGCTAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAg > 1:1557299/4‑150 (MQ=37) ttggcCGCGCAGCTTGGCCAGGCCCTGGACA‑‑CTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAg > 1:4201345/4‑150 (MQ=38) cagcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGt < 1:10297/150‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTgg > 2:248680/1‑105 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTgg < 1:248680/105‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtg < 2:45866/150‑1 (MQ=255) agcCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCAGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtg > 1:4236232/1‑150 (MQ=255) cgcgCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatg < 2:5339425/150‑1 (MQ=255) cgcgCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtga > 2:245327/1‑148 (MQ=255) gcgcAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatga < 2:1096764/150‑1 (MQ=255) gcgcAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGtgatga > 1:785958/1‑150 (MQ=255) | CAGAGGGGCCGCGCTGGCGGCCCCGAAAGCTCATGAAAGTTCAATGAAGCAGGCGTGCGTGAGGTTGGGTTCGAGCAGCGCTTGTACGTCGTCGAGCAGGGTGGCCTCATGCGGCACCTGGAAGTGCCCACAGGCCAGCAGCCGCGCAG‑‑TGTCCAGGGCCTGGCCAAGCTGCGCGGCCAAGGCTTCGCGCTCATCGTCACGGCCCGCTACCCACCAACTGTGCGGTACCACCTGCACGGGCTGGCACGTGTGCAGCTCACGCGACAGGCGCTTGAGGCTGCGCGCAGTGATGA > NC_002947/4770791‑4771083 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |