| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,011,124:1 | +T | 12.9% | intergenic (+43/+39) | norM → / ← PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,011,124 | 1 | . | T | 12.9% | 279.3 / 45.9 | 85 | intergenic (+43/+39) | norM/PP_5263 | multidrug resistance protein NorM/GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (34/40); new base T (3/8); total (37/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.04e-01 | |||||||||||
GGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCC > NC_002947/6010976‑6011270 | ggggCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTgc‑g < 2:1551452/150‑1 (MQ=255) gggCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTgc‑gc < 2:591633/150‑1 (MQ=255) tGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTc < 1:2870097/150‑1 (MQ=255) tGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTc < 2:2090640/150‑1 (MQ=255) ggCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTcc < 1:18496/150‑1 (MQ=255) gCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGAGTGC‑GCGGTccc > 2:3959556/1‑150 (MQ=255) tgtgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtgt < 1:3937275/150‑1 (MQ=255) tgtgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtgt < 2:2713185/150‑1 (MQ=255) tgtgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtgt < 1:1317588/150‑1 (MQ=255) gtgCGGCTGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtgtg < 1:3729020/150‑1 (MQ=255) gtgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtgtg < 1:3355709/150‑1 (MQ=255) tgatcgggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTgg < 1:1954315/144‑1 (MQ=255) tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTgg < 1:2556429/150‑1 (MQ=255) tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTgg < 1:2680071/150‑1 (MQ=255) tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTgg < 1:524266/150‑1 (MQ=255) tgCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTgg < 2:4329804/150‑1 (MQ=255) cggcggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGa < 1:2024784/150‑1 (MQ=255) ggcggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAg < 1:4123082/150‑1 (MQ=255) gcggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGc < 1:3343825/150‑1 (MQ=255) caggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGa < 1:4443332‑M2/22‑1 (MQ=255) caggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGa < 1:988953‑M2/22‑1 (MQ=255) caggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGa < 1:792974‑M2/22‑1 (MQ=255) ggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGCgg < 2:2936308/150‑1 (MQ=37) ggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGCgg < 2:2764103/150‑1 (MQ=37) ggTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGCgg < 2:2464843/150‑1 (MQ=37) ggTGGCGCTGACCTTTGGCTGTGAGTGGCGGATGAAACGGTTGTAGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCAATTCGCGGGCAACCCCGCCCCCAC‑C‑GGCATGC‑CCGGTACCGGGTGGAGCgg > 1:825210/1‑150 (MQ=255) ggataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGc < 2:3856533‑M2/24‑1 (MQ=255) tGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGc < 1:5401921/150‑1 (MQ=255) tGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGc < 1:3861861/150‑1 (MQ=255) gataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGCg < 1:5417779‑M2/25‑1 (MQ=255) ataacgacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGCgg < 1:1234430‑M2/26‑1 (MQ=255) gcgcTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGt < 1:1480252/150‑1 (MQ=25) gcgcTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGt < 1:309501/150‑1 (MQ=255) cgcTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGAGGGCGTg < 1:4336560/150‑1 (MQ=25) gcTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGc < 1:4330529/150‑1 (MQ=255) gacagggtggtggggatactcggggataccgagctttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGCGGgcgcg > 2:1853807‑M2/120‑148 (MQ=255) tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTGGGCATGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑AGGGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGaa < 2:577815/150‑1 (MQ=21) tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtg > 2:289442/1‑128 (MQ=255) tttGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCtg < 1:289442/128‑1 (MQ=255) gggCTTTGCGGGGCGGATGAAACGGTGGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTGCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATGGC‑GCGGTCCCTGTGGGTGCGGGCGTGCCCGCGAaga < 2:3671973/149‑1 (MQ=38) tttGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGcc > 2:4908501/1‑150 (MQ=255) gTGGCGGATGAACCGGTTGTTGGGTACGGCGGGGGTTCTTACATAAGCTGCTGTTTCGGCCTGAGTTCCGGGCCTCTTGGTGGGCACGCCCGCTCCCACTG‑GGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGcccggaa < 1:3114679/150‑5 (MQ=17) tGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGTGGCCCTAAAg > 2:5121936/1‑150 (MQ=255) cGGATGAAACGGTTGTTGGTTTCGGCGGGGGTTCTTACAGATGCGGCTGTTTCGGCCTGACTCCGGGGCCTCTTCGGGGCCACGCCCGCTCCCTT‑A‑GTTTTGC‑GCGTTCCCTGTGGGTGGGGGCGGGCCCGCGAAGAGGCCCTAAAGGac < 2:1348515/150‑1 (MQ=255) aaCGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGGACGCCCCCACCCAC‑A‑GGATTTC‑GCGGGCCCTGTGGGAGCGGGCGGGCCCGCCTACACGGCCGAAAGGACCCCCAcc > 1:388767/1‑150 (MQ=255) aaCGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTATTAGCGGGCAAGCCCGCTCCCAC‑A‑GGCTTGG‑GCGGTCCCAGTGGGAGCCGGCGTGCCCCCGAATAGGCCCAAAATGACACCCGcc > 1:3085861/1‑150 (MQ=255) tttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGc > 1:4866498‑M2/86‑109 (MQ=255) tttaccacgcgctgctcggcaagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGAGc < 2:4866498‑M2/24‑1 (MQ=255) gggTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGt < 2:1814876/109‑1 (MQ=255) gggTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGt > 1:1814876/1‑109 (MQ=255) ggggTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGCCACCCTCCAACTGGCGGCCCGGCGCCTg > 2:3994383/1‑150 (MQ=255) caagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGa < 2:965546‑M2/22‑1 (MQ=255) caagaaccacggttgaagcaattggggccgcttcgcggcccttcgcgggcacgcccgctcccacagGTTTGCTGAGATCTCTGTGGGa > 1:965546‑M2/67‑88 (MQ=255) gAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTgc‑g < 1:3676190/65‑1 (MQ=255) gAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTgc‑g > 2:3676190/1‑65 (MQ=255) tgTTTCGGCCTGACTTCCGGGCCTCTTGGCGGGCACGCCCCCTCCCAA‑A‑GGATTGC‑GCGGTCCCGGTGGGCGCCGGCGTGCCCCCCAAGAGGCCCGAAAGGCCCCCCGCCAACAGGCGGCCCGGCGCCTGCAGCAAATACGCCATCaaag > 2:3691999/1‑148 (MQ=255) ccGGGCCTCTTCGCGGGCACCCCCCCACCCAC‑A‑GGATTGC‑GCCGTCCCGGTGGGAGCGGGCGGGCCCGCGCACGGGCCCGAAAGGGCACCCGCCCACTGGCGGCCCGGCGCCAGCCGCACATACGCCCGCAATTCCCCAATCGGGAGCgg > 2:2882921/1‑150 (MQ=255) ccGGGCCTCGTCGCGGGCACGCCCGCTCCCAC‑A‑GGGTTGC‑GCGGTCCCGGTGGGAGCGGGGGTGCCCGCGAAGAGGCCCGAAAGGACACCCACCCACGGGCGGCCCGGCGCCGGCCGCCACTACGCCCGCACTTCCCCGATGGGGCGCgg > 2:2882964/1‑150 (MQ=16) ggggCCTCTTCGGGGGCACGCCCGCTCCCAC‑T‑TTTTTGC‑GCGGTCCGTGTGGGTGGGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGt < 1:3273141/149‑1 (MQ=255) ttcgcgggcacgcccgctcccacaggGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGAc > 2:1305100‑M2/27‑150 (MQ=255) cacgcccgctcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTCTCGGTAGCGGTCTGCTGACCAGGAAGc > 2:3271008‑M2/18‑150 (MQ=255) cacgcccgctcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGc > 1:4675073‑M2/18‑150 (MQ=255) acgcccgctcccacaggGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCCGGCGCCTGCAGCAAATACGCCATCAATTCCCCTCTCGGTAGCGGTCTGCTGACCAGGAAGcc > 1:3339311‑M2/18‑150 (MQ=255) cgcccgctcccacaggGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCt < 1:1305100‑M2/134‑1 (MQ=255) cgctcccacaggGACCGC‑GCAAT‑CCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCCGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCa > 1:4544623‑M2/13‑150 (MQ=255) gctcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCAc > 2:1037342‑M2/11‑150 (MQ=255) tcccactgGCTTGC‑GCGGTCCGTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCt < 1:3959556‑M2/142‑1 (MQ=255) tcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGcc > 2:2185352‑M2/9‑101 (MQ=255) tcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGa < 1:5193358‑M2/130‑1 (MQ=255) tcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGa > 2:5193358‑M2/9‑138 (MQ=255) tcccacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAAGACGCCAGCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCt > 1:3916690‑M2/9‑150 (MQ=255) tcccacagGATTGC‑GCGGTCCCGGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGcc < 1:2185352‑M2/93‑1 (MQ=255) cacagGATTGC‑GCGGTGCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCCTCAATTCCCCTATCGGTAGCGGTCTGCTGACCCGGAAGCCTTGCACCTGGt > 1:2417620‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTc > 2:3701831‑M2/6‑64 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTc < 1:3701831‑M2/59‑1 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGTCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 1:4943299‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCCGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 2:2093955‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 2:4627226‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 1:2051357‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 2:5279106‑M2/6‑150 (MQ=255) cacagGATTGC‑GCGGTCCCTGGGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGt > 2:522881‑M2/6‑150 (MQ=255) acagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTc > 1:636689‑M2/5‑150 (MQ=255) acagGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTc > 1:838570‑M2/5‑150 (MQ=255) gGATGGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCa < 1:4908501‑M2/149‑1 (MQ=255) gATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTgcag < 1:656469/83‑1 (MQ=255) gATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTgcag > 2:656469/1‑83 (MQ=255) gATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAg < 1:1037342/150‑1 (MQ=255) gATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCCGCTGACCAGGAAGCCTTGCACCTGGTCGCAg > 2:2542403/1‑150 (MQ=255) ttGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGcc > 1:5435891/1‑150 (MQ=255) | GGGGCTGGCATGTGCGGCGGTGGCGCTGACCTTTGGCTTTGAGTGGCGGATGAAACGGTTGTTGGGTAAGGCGGGGGTTCGTACAGAAGCTGCTGTTTCGGCCTGACTTCCGGGCCTCTTCGCGGGCACGCCCGCTCCCAC‑A‑GGATTGC‑GCGGTCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCCTAAAGGACACCCTCCAACTGGCGGCCAGGCGCCTGCAGCAAATACGCCATCAATTCCCCTATCGGTAGCGGTCTGCTGACCAGGAAGCCTTGCACCTGGTCGCAGCC > NC_002947/6010976‑6011270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |