| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,251,595:1 | +G | 5.1% | coding (253/603 nt) | PP_1094 ← | electron transport complex protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,251,595 | 1 | . | G | 5.1% | 882.6 / 37.3 | 196 | coding (253/603 nt) | PP_1094 | electron transport complex protein |
| Reads supporting (aligned to +/- strand): ref base . (88/98); new base G (2/8); total (90/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
CCCCAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGC > NC_002947/1251446‑1251744 | cccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCCGGATAATGGCGCTTGGCTTACC‑t > 2:5443352/1‑150 (MQ=255) cccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑t > 2:3734895/1‑150 (MQ=255) cccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑t > 2:3071433/1‑150 (MQ=255) cccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑t > 2:1009527/1‑150 (MQ=255) ccAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑Tg > 1:2796198/1‑150 (MQ=255) cAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGc > 2:5217610/1‑150 (MQ=255) aGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTAccgtgc < 1:4295708/150‑5 (MQ=255) ggCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCa < 1:5388120/150‑1 (MQ=255) gCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑Tg > 2:432636/1‑146 (MQ=255) gCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑Tg < 1:432636/146‑1 (MQ=255) cGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATa < 2:1780533/150‑1 (MQ=255) gATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAg < 2:806857/150‑1 (MQ=255) gATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAg < 2:2386209/150‑1 (MQ=255) gATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAg < 2:4888298/150‑1 (MQ=255) aTCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGt > 1:4631947/1‑150 (MQ=255) aTCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGt < 2:2979227/150‑1 (MQ=255) aTCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGt > 1:892454/1‑150 (MQ=255) tCGCCCAGCCCGGGGCTTGCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTg < 2:3708247/150‑1 (MQ=255) gCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGc < 2:5087405/150‑1 (MQ=255) gCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGc > 2:3501674/1‑150 (MQ=255) cAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACg > 1:2190339/1‑150 (MQ=255) gCCTGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGt > 1:1063776/1‑150 (MQ=255) gCCTGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGt > 1:5051850/1‑150 (MQ=255) ggggCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgc < 1:2734030/150‑1 (MQ=255) gCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACCGTGCCACTATGGCA‑GGTAAgccaa < 1:2903167/150‑3 (MQ=255) tttCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCa > 1:2291973/1‑150 (MQ=255) ttgttCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACg > 1:1109349/1‑150 (MQ=255) gACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTAtt > 2:591607/1‑150 (MQ=255) cAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg < 1:271104/150‑1 (MQ=255) cAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTgg > 1:1564365/1‑150 (MQ=255) aaCCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTggg > 1:3689356/1‑150 (MQ=255) tGGCTGCCGATCAGCGGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCctc > 2:3620035/1‑150 (MQ=255) gCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCctct > 2:4745594/1‑146 (MQ=255) gCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCctct < 1:4745594/146‑1 (MQ=255) gATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggc > 2:484716/1‑150 (MQ=255) aTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggcg > 2:5018819/1‑150 (MQ=255) aTCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTgcggcg < 1:1544868/150‑1 (MQ=255) tCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGcggcgg < 1:1213499/150‑1 (MQ=255) gccggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGcc > 1:4173902/1‑150 (MQ=255) cggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCtt < 1:349352/150‑1 (MQ=255) cggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCtt < 1:3244077/150‑1 (MQ=255) ggccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTg < 2:4038161/150‑1 (MQ=255) gccgTCCGTGGTGATGTCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCTATTGGCTTACC‑TGCCATAGTGGCACGGTAAGCAGCCAGGATACGGCTATTGTGCCTCTGTTCGGCGGGCCTTgg < 2:2184032/150‑1 (MQ=255) gccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTgg < 2:4584189/150‑1 (MQ=255) gccgTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTgg < 1:236200/150‑1 (MQ=255) gtggtgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCggg > 1:2399071/1‑150 (MQ=255) tgATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt > 1:1700215/1‑150 (MQ=255) aTGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTcc > 2:3386992/1‑150 (MQ=255) ggCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAg > 2:3266882/1‑150 (MQ=255) ggCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAg < 1:3543653/150‑1 (MQ=255) gCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAgg > 1:1448317/1‑150 (MQ=255) cGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAggg < 2:2855419/150‑1 (MQ=255) cGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAggg < 2:2533264/150‑1 (MQ=255) gACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAgggg > 1:2020514/1‑150 (MQ=255) cTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 1:3396983/150‑1 (MQ=255) cTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTgg < 2:3236812/150‑1 (MQ=255) cAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt < 1:1992417/150‑1 (MQ=255) aGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATATGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTg > 2:1674589/1‑150 (MQ=255) gCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGt > 2:4206275/1‑150 (MQ=255) cACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTc > 2:3801892/1‑150 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 1:1809776/150‑1 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa > 2:1849763/1‑150 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa < 1:1810081/150‑1 (MQ=255) aCGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCa > 2:411988/1‑150 (MQ=255) gCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAc > 1:5306434/1‑150 (MQ=255) cccGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTAcc > 1:4144333/1‑150 (MQ=255) ggCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATGGcgcggcta > 1:1324723/1‑143 (MQ=255) tACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc > 1:5305217/1‑150 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 2:2674225/150‑1 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 1:4527627/150‑1 (MQ=255) aCCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgca < 1:3984407/150‑1 (MQ=255) ccTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgcagca > 2:3673070/1‑150 (MQ=255) cTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCAc > 2:3301105/1‑150 (MQ=255) gggCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACgg < 1:4049922/150‑1 (MQ=255) gCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGcc < 1:73205/150‑1 (MQ=255) tgtgtgATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGc > 1:1279355/1‑150 (MQ=255) gATCAGGATAATGGCGCGTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTGGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTg > 2:2771068/1‑150 (MQ=255) ggATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTggcggc < 1:1431175/150‑1 (MQ=255) aTAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCtt < 2:2574727/150‑1 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt < 2:2959367/93‑1 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCttt > 1:2959367/1‑93 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCttt > 1:4934921/1‑150 (MQ=255) tAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCttt < 1:3801892/150‑1 (MQ=255) aTGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGc < 1:3424872/150‑1 (MQ=255) aTGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGc < 2:1448317/150‑1 (MQ=255) tGGCGCTTGGCTTTCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCAGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCa < 2:2051782/150‑1 (MQ=255) ggCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc > 1:648653/1‑121 (MQ=255) ggCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGgc < 2:648653/121‑1 (MQ=255) gcgcTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgc > 2:1723738/1‑150 (MQ=255) ggcggCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCggg > 2:1397568/4‑81 (MQ=21) cTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAgctgc > 1:4273897/1‑150 (MQ=255) gCTTACCGTGCCACTATGGCA‑GGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGtt > 1:3626159/1‑94 (MQ=37) cTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTc < 2:723966/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2977848/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2736635/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 2:2482024/150‑1 (MQ=255) ttACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCa < 1:2572179/150‑1 (MQ=255) tACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAg < 2:2412783/150‑1 (MQ=255) aCC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAg < 2:786255/97‑1 (MQ=255) c‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAgcgc > 1:3073928/1‑150 (MQ=255) | CCCCAGGCGATCGCCCAGCCCGGGGCTTTCCTGTTGTTCGACAACCTGGCTGCCGATCAGCCGGCCGTCCGTGGTGATGGCGACGCTCAGCACGATCGGCCCGGCATACCCCTGGGCCTGTGTGATCAGGATAATGGCGCTTGGCTTACC‑TGCCATAGTGGCACGGTAAGCCGCCAGGATACGGCTATTGGGCCTCTGTGCGGCGGGCCTTGGCAGCGGGCTTTCCAGGGGCTGGTTGTCATAGCTACCGTCGGGCAGCACGGCCAGCCGCTGGCGGCTTTGCAGCTGCTTTTCAGCGC > NC_002947/1251446‑1251744 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |