New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 235329122 (0.740)10 (0.070) 7/248 NT 7.5% intergenic (+26/+99) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase
?NC_002947 = 235390 134 (0.880)intergenic (+87/+38) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase

TGGCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/235173‑235329
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGTCCGCCA  <  NC_002947/235390‑235242
                                                                                                                                                                                                                                                                                                                  
TGGCGGACTTCCCGCAGGCAAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTC                                                                                                                                                              >  2:2490908/1‑150
  GCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGC                                                                                                                                                            >  2:3841203/1‑150
   CGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCG                                                                                                                                                           <  1:3925005/150‑1
     GACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGG                                                                                                                                                         <  2:4041878/150‑1
       CTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGACGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCA                                                                                                                                                       >  1:1534960/1‑150
                                  ACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTAATGCACAAG                                                                                                                            >  2:1439322/1‑150
                                                          GCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTG                                                                                                    <  2:4736745/150‑1
                                                          GCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTG                                                                                                    <  2:4736621/150‑1
                                                           CCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGG                                                                                                   <  1:1439322/150‑1
                                                           CCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGG                                                                                                   <  2:3146858/150‑1
                                                            CGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGG                                                                                                  <  1:1194433/150‑1
                                                                               GGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGT                                                                                                     <  1:1405634/128‑1
                                                                               GGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGT                                                                                                     >  2:1405634/1‑128
                                                                                 AAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGG                                                                                                   >  2:3523716/1‑128
                                                                                 AAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGG                                                                                                   <  1:3523716/128‑1
                                                                                                                                                    TCGTGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTT          <  2:2042413/150‑1
                                                                                                                                                    TCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTT          <  1:5307532/150‑1
                                                                                                                                                    TCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTT          <  2:499682/150‑1
                                                                                                                                                     CGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTG         <  1:172527/150‑1
                                                                                                                                                      GCGGGCCCGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGT        <  1:520701/150‑1
                                                                                                                                                       CGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGTC       <  2:1899385/150‑1
                                                                                                                                                       CGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGTC       <  1:3881897/150‑1
                                                                                                                                                       CGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGTC       >  1:3145572/1‑150
                                                                                                                                                            ACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCGTGTCCGCCc  >  1:5043063/1‑149
                                                                                                                                                                                                                                                                                                                  
TGGCGGACTTCCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/235173‑235329
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcaCGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAAGGGCTCAACACCAGACTCAGCGCTTGCCGCTGCGGATCATCTCCATGAAGGCCGGCATCGACGCTTCCTTGTCCGCCA  <  NC_002947/235390‑235242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.