| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 458843 | 165 (1.000) | 11 (0.070) | 9/246 | NT | 6.0% | intergenic (‑61/+103) | pqqC/pqqB | pyrroloquinoline‑quinone synthase/coenzyme PQQ synthesis protein B |
| ? | NC_002947 | = 458906 | 191 (1.260) | intergenic (‑124/+40) | pqqC/pqqB | pyrroloquinoline‑quinone synthase/coenzyme PQQ synthesis protein B | |||||
CATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/458684‑458843‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGTCCC < NC_002947/458906‑458758 CATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTT > 2:3459909/1‑150CATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTT < 2:4885592/150‑1CATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTT < 2:4885440/150‑1 ATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTG > 2:3236784/1‑150 ATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTG < 2:3813293/150‑1 TCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGT < 1:1467035/150‑1 TCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGT > 1:3143134/1‑150 TCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGT > 1:3143154/1‑150 CGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTG < 1:3752219/150‑1 CGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTG < 1:4694199/150‑1 CGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTG < 2:4118786/150‑1 CGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTG < 1:2294687/150‑1 CGCCACGGGGTCCGGGTGCTGGAGGTGGTAATCGGCGCCCGTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTG < 2:5002398/150‑1 GCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGG < 2:4237366/150‑1 GCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGG < 2:3945781/150‑1 GCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGG > 1:4447879/1‑150 CCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGG > 2:550756/1‑150 CCAAGTGGTACGGGTGATGGATGTGGTAATAGGCGAACTTGGCGCGCAGGGCCTGCACGAACTCGGCAGGGGACATTGGCAGAGCGTCGCTCATTCGGATGGCACCTCTAGAACGATTATCTGGCCTGGCACATCACTCTCCCTTGTGGG > 2:550730/1‑150 CACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGA > 2:2420670/1‑150 CACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGA > 1:3865239/1‑150 TGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGG > 2:2443554/1‑150 CTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGACATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCG < 2:1574423/150‑1 CTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGACATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCG < 2:1574456/150‑1 TCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGACGTGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGG < 1:691385/150‑1 AGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAA < 1:2443554/150‑1 CTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAG < 1:5096707/150‑1 CTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGACATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAG < 2:2633072/150‑1 TCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGC > 1:479391/1‑119 TCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGC < 2:479391/119‑1 GATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCA < 1:4731319/101‑1 GATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCA > 2:4731319/1‑101 TGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATCATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTG > 1:5428015/1‑150 TGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTG > 2:1383750/1‑150 TGTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTG > 2:2954468/1‑150 GTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGC < 1:2680627/150‑1 GTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGC < 1:2920599/150‑1 GTGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGC < 2:3771168/150‑1 ttttcGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCC > 2:523384/6‑150 TGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTAC < 2:4382663/120‑1 TGGGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTAC > 1:4382663/1‑120 GGAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAA > 1:3023504/1‑150 GAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAAT < 2:4404701/150‑1 GAGCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAAT < 2:278068/150‑1 GCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGT < 2:3182330/150‑1 GCGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGT < 2:3182325/150‑1 CGGGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGTC < 1:156878/150‑1 GGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGTCCC < 1:4303094/150‑1 GGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGTCCC < 1:4303102/150‑1 CATCGCCACGTGGTACGGGTGATGGATGTGGTAATAGGCGCCCTTGGCGCGCAGGGCCTGCTCGAACTCGGCAGGGGACATTGGCAGTGCGTCGCTCATTCGGCTGGCTCCTGTAGAACGATTATCTGGCCTGGCACATCTCTCTCCCTTGTGGGAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/458684‑458843‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggGCATGCCCGCGAAAAAGCCAACACGGTCTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGTCCGCTCCCACAAGGGAGAGAGATGTGCCAGGCCAGATAATCGTTCTACAGGAGCCAGCCGAATGAGCGACGCACTGCCAATGTCCC < NC_002947/458906‑458758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |