| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 726912 | 95 (0.580) | 8 (0.050) | 6/240 | NT | 7.4% | intergenic (‑156/+111) | PP_0620/PP_0621 | GntR family transcriptional regulator/hypothetical protein |
| ? | NC_002947 | = 726971 | 114 (0.770) | intergenic (‑215/+52) | PP_0620/PP_0621 | GntR family transcriptional regulator/hypothetical protein | |||||
AGCATTTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/726752‑726912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGTTTTTATCTGCAATTTCGTGTTCCACATATCCCTCCCCGACCCTTTCACACCATTTACGACCCCTCCCCCCCGCC < NC_002947/726971‑726824 AGCATTTCGCTATTTTTCATAGTTATGCGGATAGATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTG > 2:5419560/1‑150 gctTTTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTCGCGAATTTTGCCCGGCCGGGTCACTGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGT < 2:1955759/147‑1 gaATTTCGCTCTCTTTCATTTTTAGGCGTAGAACTAGTATTTAGCTAATTTTGCCCGGCCGGGTCAACGCTGGCGGGGGGGCGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGT < 1:2602873/148‑1 cCATTGCTCTATTTTTCATATTTTTGCGGATAAATATGATTTAGCGAATTTTGCCCGGACGGGACAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGT < 1:2602816/149‑1 GCATTTCGCTATTTTTCATCTTTATGCGGATAAATAGGATTTAGCGATTTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGT < 2:3838798/150‑1 GCATTTCGCTATTTTTCATATTTATGCGGATAAATTGGATTTAGCGAATTTTGCCCGGCCGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGT < 2:1423826/150‑1 tTTTGGCTTTTTTTGATCTTTAGGCGGATACCTTGGATTTAGCGAATTGTGCCCGGCCGGGTCACTGCTGGCGGGGGGGAGGGGTGGTAAATGGTGTGAATGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAACAACTGTGG < 2:518758/149‑1 agTTCGCTATTTTGCAGATTTCTGCGGATAAATAGGATTTAGCGAATTGGGCCCGGACGGGTCACGGCGGGCGGGGGGGCGGGGGCGTAAATGGGGTGAACGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGG < 1:3199265/148‑1 ATTTCGCTATTTTTCATATTTATGCGGATAAATAGTATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGG < 2:278092/150‑1 ATTTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGG < 2:4848358/150‑1 ATTTCGCTATGTGACATATTTCTGGGGATAACTAGGATTTAGCGAATGTGGCCCGGCCGGGTCAATGCTGGCGGGGGGGCGGGGTCGTAAAGGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGG < 1:5186873/150‑1 TTTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGACCACGAAATTGCAGAGAAAAACTGTGGG > 2:4367771/1‑150 TTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTTAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA > 1:4211717/1‑150 TTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA < 2:3940938/150‑1 GCTTTTTGTCATATTTATGCGGATATATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAATAACGGTGGGAGCG > 2:3541205/1‑150 GCTATTTTTCATATTTCTGCGGAGACATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCG < 2:1374470/150‑1 GCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGACAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGAGATGTGGAACACGAAAATGCAGATAAAAACTGTGGGAGCG > 2:3541207/1‑150 CTATTTTTCATATTTATGCGGATATATAGGATTTTGCGAATTTTGCCCGGAGGGGTCAATGCGGGCGGGGGGGAGGGGTCGTAAATGGTGTGAATGGGTCGGGGAGGGATATGTGGAACACGAAATGGCAGATAAAAACTGTGGGAGCGG < 2:805123/150‑1 CTATTTTTCATATTTATGCGGATAAATAGGATTTCGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGG < 2:805171/150‑1 CTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGG > 1:1055149/1‑150 TATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAGAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGG > 2:4296021/1‑150 gTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCT > 2:3384813/2‑150 CCCGCACGGGCCAAGGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGCCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGC < 1:2037364/150‑1 ccCAATGCGGGCGGGGGGGCGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCG < 2:5153154/148‑1 AATGCGGGCGGGGGGGAGGGGTCGTAATGGGTGTGAAAGGGGCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGG < 2:5145283/150‑1 cTGCGGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGG < 2:2592036/149‑1 agGCTGGCGGGGGGGCGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGG < 2:1843708/148‑1 ccGGCGGGGCGGCGGGGTCGTAACTGGTGTGACAGGGTCGGGGAGGGAGAGGTGGAACACGAAATTGCAGATAAAATCTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGGGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCAC < 1:2792098/148‑1 GGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGC < 2:820577/150‑1 TGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTG > 1:4482027/1‑53 TGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTG < 2:4482027/53‑1 TCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA > 1:1165479/1‑48 TCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA < 2:3915778/48‑1 TCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA < 2:1165479/48‑1 TCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGA > 1:3915778/1‑48 CTGTGGGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGTTTTTATCTGCAATTTCGTGTTCCACATATCCCTCCCCGACCCTTTCACACCATTTACGACCC < 1:986670/150‑1 GGAGCGGGCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGTTTTTATCTGCAATTTCGTGTTCCACATATCCCTCCCCGACCCTTTCACACCATTTACGACCCCTCCC < 2:3923030/150‑1 GCTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGTTTTTATCTGCAATTTCGTGTTCCACATATCCCTCCCCGACCCTTTCACACCAGTTACGACCCCTCCCCCCCGCC > 2:2901822/1‑150 AGCATTTCGCTATTTTTCATATTTATGCGGATAAATAGGATTTAGCGAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/726752‑726912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcTTGCCCGCGAAGCAGGCACCACGGTGTATGGCACCGGCTTCGCCGGTGTTCGCGGGCACGCCCGCTCCCACAGTTTTTATCTGCAATTTCGTGTTCCACATATCCCTCCCCGACCCTTTCACACCATTTACGACCCCTCCCCCCCGCC < NC_002947/726971‑726824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |