| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 796828 = | 96 (0.580) | 10 (0.070) | 9/236 | NT | 10.7% | intergenic (+27/‑163) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein |
| ? | NC_002947 | 796898 = | 82 (0.570) | intergenic (+97/‑93) | PP_0681/PP_0682 | hypothetical protein/inner membrane protein | |||||
ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796992‑796828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGA > NC_002947/796898‑797045 ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCG > 2:4062156/1‑150 TGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTTCCTGTGGGA‑‑GCGG > 1:2706729/1‑150 TGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGG > 1:658431/1‑150 GTTCAGGACTCAACAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTT < 1:963811/150‑1 TTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTG > 1:836732/1‑150 TCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGT < 1:1139457/150‑1 TCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGT < 1:2610669/150‑1 TCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGT < 2:2223066/150‑1 AGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAACGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACCGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGT < 2:2600444/150‑1 GGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCACGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTC < 2:3428960/150‑1 GGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTC > 1:3057562/1‑150 GACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCG > 1:1249382/1‑150 GACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCG > 1:1249518/1‑150 ACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGC < 2:5324538/150‑1 ACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGC < 2:2178611/150‑1 TCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGA < 2:2896565/150‑1 TCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGA < 2:2706729/150‑1 AGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGT < 1:2042848/140‑1 AGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGT > 2:2042848/1‑140 AGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTTGTA‑‑GCGGCCTTGTGTCGCGAT‑GGGCCGCAAAGCGGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGC > 2:2073944/1‑150 GCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGTGTGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAG > 2:3933361/1‑150 TGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCGTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGA > 2:3036823/1‑150 ACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGT < 2:1083980/102‑1 ACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGT > 1:1083980/1‑102 AAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAAC > 2:2049360/1‑150 GGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATTAGTCCTGAACTT > 1:3954592/1‑150 GGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTT > 2:1506101/1‑150 AGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGAT‑GGGCCGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAA > 1:3239689/1‑150 GATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAAC > 1:2313593/1‑150 GGCCTTGGGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTG < 1:3933361/150‑1 GCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCTATGTATGCCTCGCGCTGG < 2:2122933/150‑1 GCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGG > 1:4885989/1‑150 GCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGG > 2:4465999/1‑150 GCCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGG > 1:5317988/1‑150 CCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGC > 1:3491502/1‑150 CCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGC > 1:3491454/1‑150 CCTTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGAGGCATACATCGCGttttc < 2:2340662/150‑6 TTGTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTGTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTAACCTCGAAAACGCGATGTATGCCTCGCGCTGGCTG > 2:5420003/1‑150 GTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCT < 2:3491454/150‑1 GTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCT < 2:3491502/150‑1 GTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCT < 1:4465999/150‑1 GTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCAT < 1:3605006/105‑1 GTGTCGCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCAT > 2:3605006/1‑105 GCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCAC > 1:4297717/1‑150 GCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCAC < 2:4297717/150‑1 GCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCAC > 2:2116764/1‑150 GCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCC > 1:4538365/1‑62 GCGATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCC < 2:4538365/62‑1 GATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCG > 2:2600998/1‑150 ATCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGA < 1:3307670/150‑1 ATGAAGTTCAGGACTCATCAGGTGACTAAAAAAGCGACGGCGAGTATAGCCAGCCACCTGTTACAGCAAAAGCCCGGGGGCTGCTCCGCAGCCTGATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGA‑‑GCGGCCTTGTGTCGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/796992‑796828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccttgtgtcgcgatCAGGCTGCGGAGCAGCCCCCGGGCTTTTGCTGTAACAGGTGGCTGGCTATACTCGCCGTCGCTTTTTTAGTCACCTGATGAGTCCTGAACTTCATGGAACGTATCCTCGAAAACGCGATGTATGCCTCGCGCTGGCTGCTCGCACCGA > NC_002947/796898‑797045 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |