New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 796843	89 (0.540)	5 (0.030)	4/236	NT	5.9%	intergenic (+42/‑148)	PP_0681/PP_0682	hypothetical protein/inner membrane protein
	?	NC_002947	= 796881	82 (0.570)					intergenic (+80/‑110)	PP_0681/PP_0682	hypothetical protein/inner membrane protein

GGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/796682‑796843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG  <  NC_002947/796881‑796733                                                                                                                                                                                                                                                                                                                         GGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCG                                                                                                                                                                   >  2:658431/1‑150  ggTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGC                                                                                                                                                                  <  2:1854509/148‑1  GTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGC                                                                                                                                                                  <  2:69546/150‑1  GTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGC                                                                                                                                                                  <  1:1664059/150‑1  GTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGC                                                                                                                                                                  <  2:3750678/150‑1   TTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCG                                                                                                                                                                 >  2:1249518/1‑150   TTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCG                                                                                                                                                                 >  2:1249382/1‑150   TTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCG                                                                                                                                                                 >  1:4417385/1‑150    TATGAAGTGGCCGATGTCCGTCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGGGGATCATTGGTGTGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGACTGGCGGGGCCGCTTTGCTGCCCATCGCGt                                                                                                                                                                <  2:3713989/150‑2    TATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA                                                                                                                                                                <  2:3713945/150‑1    TATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA                                                                                                                                                                <  2:4902379/150‑1    TATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA                                                                                                                                                                <  1:3498048/150‑1    TATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGA                                                                                                                                                                <  2:3727238/150‑1      TCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACA                                                                                                                                                              >  1:5396193/1‑150        AAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACA                                                                                                                                                            >  2:3355792/1‑150         AGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAA                                                                                                                                                           >  2:1893478/1‑150           gGGCCGACGACCCGCAGAGCGGGTGTCTGCATGTGCAGGCGCAGTCGCGGCGGAACAATGGTGAGCGGTGTCGCACCCTGGGGGACTACCAGTTTCATCCTGAGACCTGAAGACTGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG                                                                                                                                                         <  2:4603163/149‑1           TGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG                                                                                                                                                         <  2:2580354/150‑1           TGGCCGATGACCCGCAGATCTGGTGTCTGCAATTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG                                                                                                                                                         <  2:612102/150‑1            GGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGC                                                                                                                                                        <  2:3677530/150‑1                                      TGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCG                                                                                                                                                                   <  2:485697/113‑1                                      TGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCGTTGCGGCCCAACG                                                                                                                                                                   >  1:485697/1‑113                                          TTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG                                                                                                                                                         <  1:3744714/119‑1                                          TTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGG                                                                                                                                                         >  2:3744714/1‑119                                                      GTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGC                                                                                                              <  1:3377669/150‑1                                                              GGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTC                                                                                                      <  2:4214807/150‑1                                                                    ATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATG                                                                                                <  2:260190/150‑1                                                                                  CGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTC                                                                                                      >  1:4013618/1‑130                                                                                  CGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTC                                                                                                      <  2:4013618/130‑1                                                                                                                                                 ggacCGCGACACACCCCCACACCCCCACCGCACGCCGATGCTGTACGTGGGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCA                   <  1:1565202/146‑1                                                                                                                                                  aatgaccACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCAT                  <  1:2462698/143‑1                                                                                                                                                   ATCGCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTGGCGACACCGCTCACCATT                 >  2:3090686/1‑150                                                                                                                                                     cggtACACAAGCCCCCAGTCCCACACCAAGCCGTTGGTGTAGCTGTGGTTTCGGCCTTGTTTCGGTATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGA               <  1:286688/146‑1                                                                                                                                                      GCGACACACGGCCACACTCCCACAGCAAGCCGATGCTGTACCGGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGAT              <  2:3652972/150‑1                                                                                                                                                      GCGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGAT              >  1:3259749/1‑150                                                                                                                                                       CGACACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATC             >  2:3905905/1‑150                                                                                                                                                          CACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAGACTGGTAATCCCCCCGGTTGCGACACCGCTCACCATTGATCCGC          >  2:2807248/1‑150                                                                                                                                                           aaAAGCCCACACACCCACACAAAGCCGATGCTTTACCTGTGGGAGGGGCTTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCC         <  1:1846099/148‑1                                                                                                                                                           ACAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCC         >  1:2205018/1‑150                                                                                                                                                            CAAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCG        <  1:2122933/150‑1                                                                                                                                                             AAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGC       >  1:3370106/1‑150                                                                                                                                                             AAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAAGCCCCCGGGTTGCGACACCGCTCACCCTGGCTCCGCCGC       >  2:4732574/1‑150                                                                                                                                                             AAGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGGCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGC       >  1:1359368/1‑150                                                                                                                                                              AGGCCACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTATTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCA      >  1:817189/1‑150                                                                                                                                                                  CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG  >  1:3286239/1‑150                                                                                                                                                                  CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG  >  1:2714123/1‑150                                                                                                                                                                  CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG  >  1:2590989/1‑150                                                                                                                                                                  CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGC                                                                                             >  1:1205197/1‑59                                                                                                                                                                  CACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGC                                                                                             <  2:1205197/59‑1                                                                                                                                                                                                                                                                                                                         GGTTATCAAGTGGCCGATGACCCGCAGATCTGGTGTCTGCATTTGCAGGCGCAGTTGCGGCGGATCAATGGTGAGCGGTGTCGCAACCTGGGGGATTACCAGTTTCATCCTGAGACCTGAAGAATGCCGGGGCCGCTTTGCGGCCCATCGCGACACAAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/796682‑796843 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcgcgacacaaggccACACTCCCACAGCAAGCCGATGCTGTACCTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCCGGCATTCTTCAGGTCTCAGGATGAAACTGGTAATCCCCCAGGTTGCGACACCGCTCACCATTGATCCGCCGCAACTG  <  NC_002947/796881‑796733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.