| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1273270 | 162 (0.980) | 11 (0.070) +GC |
4/264 | NT | 6.1% | intergenic (+55/+113) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein |
| ? | NC_002947 | 1963699 = | 180 (1.090) | intergenic (+86/‑133) | PP_1760/yegE | ABC transporter ATP‑binding protein/phosphodiesterase domain‑containing diguanylate cyclase | |||||
CCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1273182‑1273270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC > NC_002947/1963699‑1963790 || CCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCTCGAACACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGcttgc < 2:3045021/150‑6CCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGcttgc < 1:2963975/150‑6 TGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCTCGAACACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCG > 1:1157329/1‑141 TGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCTCGAACACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCG < 2:1157329/141‑1 TTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGcttgc > 1:2850312/1‑141 TTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGTCGCCTGCTTCGCGGGcttgc < 2:2850312/146‑6 GGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCGCGCCCGCGAACACGGGCGAAGCCCGAGCCATCCCCCGCGTCGCCTGCTTCGCGGGCTTGCCCGCTCCcc > 2:2987447/1‑148 tgttcGCGGGCAAGCCCGCTAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC > 1:2311053/6‑105 tgttcGCGGGCAAGCCCGCTAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC > 1:5039786/6‑105 tgttcGCGGGCAAGCCCGCTAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC < 2:2311053/100‑1 tgttcGCGGGCAAGCCCGCTAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC < 2:5039786/100‑1 || CCTGTTGGGGGCAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1273182‑1273270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCCGCGAACACGGGCGAAGCCCGTGCCATCCACCGCGGTGTCTTCTTCGCGGGTAAACCCGCTCCTACAATAGCCAGCGCATACGCTGTAC > NC_002947/1963699‑1963790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |